RNA–Protein interactions for RNA: ENST00000216489.7

ALKBH1-201, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH1, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-201ENST00000216489 C1orf167Q5SNV9 1468 aa17.29■□□□□ 0.36
ALKBH1-201ENST00000216489 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
ALKBH1-201ENST00000216489 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
ALKBH1-201ENST00000216489 ZBTB40Q9NUA8 1239 aa17.28■□□□□ 0.36
ALKBH1-201ENST00000216489 IP6K1Q92551 441 aa17.28■□□□□ 0.36
ALKBH1-201ENST00000216489 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.36
ALKBH1-201ENST00000216489 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.36
ALKBH1-201ENST00000216489 IPO9Q96P70 1041 aaKnown RBP17.27■□□□□ 0.35
ALKBH1-201ENST00000216489 C19orf44Q9H6X5 657 aa17.27■□□□□ 0.35
ALKBH1-201ENST00000216489 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
ALKBH1-201ENST00000216489 TMEM94Q12767 1356 aa17.26■□□□□ 0.35
ALKBH1-201ENST00000216489 ARHGAP45Q92619 1136 aa17.26■□□□□ 0.35
ALKBH1-201ENST00000216489 KRT28Q7Z3Y7 464 aa17.26■□□□□ 0.35
ALKBH1-201ENST00000216489 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
ALKBH1-201ENST00000216489 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
ALKBH1-201ENST00000216489 KIF1AQ12756 1690 aa17.25■□□□□ 0.35
ALKBH1-201ENST00000216489 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
ALKBH1-201ENST00000216489 ABCC4O15439 1325 aa17.25■□□□□ 0.35
ALKBH1-201ENST00000216489 MSH6P52701 1360 aa17.25■□□□□ 0.35
ALKBH1-201ENST00000216489 SLIT3O75094 1523 aa17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 C1orf115Q9H7X2 142 aa17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 NOP58Q9Y2X3 529 aaKnown RBP17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 GCP02774 474 aa17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 DDX17Q92841 729 aaKnown RBP17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 LRRC59Q96AG4 307 aaKnown RBP17.24■□□□□ 0.35
ALKBH1-201ENST00000216489 MAP3K5Q99683 1374 aa17.23■□□□□ 0.35
ALKBH1-201ENST00000216489 PHRF1Q9P1Y6 1649 aaKnown RBP17.23■□□□□ 0.35
ALKBH1-201ENST00000216489 MST1RQ04912 1400 aa17.22■□□□□ 0.35
ALKBH1-201ENST00000216489 VIRMAQ69YN4 1812 aaKnown RBP17.22■□□□□ 0.35
ALKBH1-201ENST00000216489 ZBTB7BO15156 539 aaPredicted RBP17.22■□□□□ 0.35
ALKBH1-201ENST00000216489 ATF3P18847 181 aa17.22■□□□□ 0.35
ALKBH1-201ENST00000216489 API5Q9BZZ5 524 aaKnown RBP17.22■□□□□ 0.35
ALKBH1-201ENST00000216489 ARHGEF25Q86VW2 580 aa17.21■□□□□ 0.35
ALKBH1-201ENST00000216489 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
ALKBH1-201ENST00000216489 USP19O94966 1318 aa17.2■□□□□ 0.34
ALKBH1-201ENST00000216489 RGS12O14924 1447 aa17.2■□□□□ 0.34
ALKBH1-201ENST00000216489 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
ALKBH1-201ENST00000216489 ALS2Q96Q42 1657 aa17.19■□□□□ 0.34
ALKBH1-201ENST00000216489 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
ALKBH1-201ENST00000216489 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
ALKBH1-201ENST00000216489 MED1Q15648 1581 aaPredicted RBP17.17■□□□□ 0.34
ALKBH1-201ENST00000216489 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
ALKBH1-201ENST00000216489 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
ALKBH1-201ENST00000216489 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
ALKBH1-201ENST00000216489 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
ALKBH1-201ENST00000216489 RGPD5Q99666 1765 aa17.16■□□□□ 0.34
ALKBH1-201ENST00000216489 DCCP43146 1447 aa17.16■□□□□ 0.34
ALKBH1-201ENST00000216489 ZC3H6P61129 1189 aaKnown RBP17.16■□□□□ 0.34
ALKBH1-201ENST00000216489 G2E3Q7L622 706 aa17.16■□□□□ 0.34
ALKBH1-201ENST00000216489 NECTIN2Q92692 538 aa17.15■□□□□ 0.34
ALKBH1-201ENST00000216489 SEC24BO95487 1268 aa17.14■□□□□ 0.33
ALKBH1-201ENST00000216489 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
ALKBH1-201ENST00000216489 FAM208AQ9UK61 1670 aaKnown RBP17.14■□□□□ 0.33
ALKBH1-201ENST00000216489 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.33
ALKBH1-201ENST00000216489 SIRT2Q8IXJ6 389 aa17.14■□□□□ 0.33
ALKBH1-201ENST00000216489 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
ALKBH1-201ENST00000216489 PTPRCP08575 1304 aa17.13■□□□□ 0.33
ALKBH1-201ENST00000216489 PXDNQ92626 1479 aa17.13■□□□□ 0.33
ALKBH1-201ENST00000216489 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
ALKBH1-201ENST00000216489 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
ALKBH1-201ENST00000216489 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
ALKBH1-201ENST00000216489 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
ALKBH1-201ENST00000216489 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
ALKBH1-201ENST00000216489 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 CADPS2Q86UW7 1296 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 LNPKQ9C0E8 428 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 BCL11AQ9H165 835 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 STRCQ7RTU9 1775 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 NUCB1Q02818 461 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 CABLES1Q8TDN4 633 aa17.12■□□□□ 0.33
ALKBH1-201ENST00000216489 F6X3S4 739 aa17.11■□□□□ 0.33
ALKBH1-201ENST00000216489 CEMIPQ8WUJ3 1361 aa17.11■□□□□ 0.33
ALKBH1-201ENST00000216489 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
ALKBH1-201ENST00000216489 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
ALKBH1-201ENST00000216489 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
ALKBH1-201ENST00000216489 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
ALKBH1-201ENST00000216489 STK31Q9BXU1 1019 aa17.1■□□□□ 0.33
ALKBH1-201ENST00000216489 NPHP3Q7Z494 1330 aa17.1■□□□□ 0.33
ALKBH1-201ENST00000216489 SLC4A10Q6U841 1118 aa17.09■□□□□ 0.33
ALKBH1-201ENST00000216489 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
ALKBH1-201ENST00000216489 MEIS3Q99687 375 aa17.09■□□□□ 0.33
ALKBH1-201ENST00000216489 ERBB3P21860 1342 aa17.09■□□□□ 0.33
ALKBH1-201ENST00000216489 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.33
ALKBH1-201ENST00000216489 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.33
ALKBH1-201ENST00000216489 ANKRD45Q5TZF3 282 aa17.08■□□□□ 0.33
ALKBH1-201ENST00000216489 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.33
ALKBH1-201ENST00000216489 CCDC30Q5VVM6 783 aa17.08■□□□□ 0.32
ALKBH1-201ENST00000216489 KDM3BQ7LBC6 1761 aa17.08■□□□□ 0.32
ALKBH1-201ENST00000216489 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
ALKBH1-201ENST00000216489 KCNQ3O43525 872 aa17.07■□□□□ 0.32
ALKBH1-201ENST00000216489 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
ALKBH1-201ENST00000216489 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
ALKBH1-201ENST00000216489 ZNF335Q9H4Z2 1342 aaPredicted RBP17.07■□□□□ 0.32
ALKBH1-201ENST00000216489 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms