RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 NME9Q86XW9 330 aa13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 COG3Q96JB2 828 aa13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 STK24Q9Y6E0 443 aa13.65□□□□□ -0.22
APOBEC3D-201ENST00000216099 CT47B1P0C2W7 299 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3D-201ENST00000216099 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
APOBEC3D-201ENST00000216099 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
APOBEC3D-201ENST00000216099 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
APOBEC3D-201ENST00000216099 FLIIQ13045 1269 aa13.64□□□□□ -0.23
APOBEC3D-201ENST00000216099 PDE3AQ14432 1141 aa13.64□□□□□ -0.23
APOBEC3D-201ENST00000216099 MARF1Q9Y4F3 1742 aaKnown RBP13.63□□□□□ -0.23
APOBEC3D-201ENST00000216099 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
APOBEC3D-201ENST00000216099 PEAK1Q9H792 1746 aa13.63□□□□□ -0.23
APOBEC3D-201ENST00000216099 TTC21BQ7Z4L5 1316 aa13.63□□□□□ -0.23
APOBEC3D-201ENST00000216099 NCKAP5LQ9HCH0 1330 aa13.63□□□□□ -0.23
APOBEC3D-201ENST00000216099 RIOK3O14730 519 aaKnown RBP13.63□□□□□ -0.23
APOBEC3D-201ENST00000216099 ACEP12821 1306 aa13.62□□□□□ -0.23
APOBEC3D-201ENST00000216099 PIK3C2AO00443 1686 aa13.62□□□□□ -0.23
APOBEC3D-201ENST00000216099 USP31Q70CQ4 1352 aa13.62□□□□□ -0.23
APOBEC3D-201ENST00000216099 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
APOBEC3D-201ENST00000216099 TTC21AQ8NDW8 1320 aa13.61□□□□□ -0.23
APOBEC3D-201ENST00000216099 BCAR3O75815 825 aa13.61□□□□□ -0.23
APOBEC3D-201ENST00000216099 IL13P35225 146 aa13.61□□□□□ -0.23
APOBEC3D-201ENST00000216099 CCDC97Q96F63 343 aaPredicted RBP13.61□□□□□ -0.23
APOBEC3D-201ENST00000216099 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
APOBEC3D-201ENST00000216099 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
APOBEC3D-201ENST00000216099 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
APOBEC3D-201ENST00000216099 RARSP54136 660 aaKnown RBP13.6□□□□□ -0.23
APOBEC3D-201ENST00000216099 MCM6Q14566 821 aa13.6□□□□□ -0.23
APOBEC3D-201ENST00000216099 AAMPQ13685 434 aa13.59□□□□□ -0.23
APOBEC3D-201ENST00000216099 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
APOBEC3D-201ENST00000216099 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
APOBEC3D-201ENST00000216099 MS4A1P11836 297 aa13.59□□□□□ -0.23
APOBEC3D-201ENST00000216099 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
APOBEC3D-201ENST00000216099 ARHGEF1Q92888 912 aaKnown RBP13.59□□□□□ -0.23
APOBEC3D-201ENST00000216099 NWD1Q149M9 1564 aa13.58□□□□□ -0.23
APOBEC3D-201ENST00000216099 NEFMP07197 916 aa13.58□□□□□ -0.23
APOBEC3D-201ENST00000216099 FNBP4Q8N3X1 1017 aaPredicted RBP13.58□□□□□ -0.23
APOBEC3D-201ENST00000216099 PRDM16Q9HAZ2 1276 aa13.58□□□□□ -0.23
APOBEC3D-201ENST00000216099 ARIH1Q9Y4X5 557 aaPredicted RBP13.58□□□□□ -0.23
APOBEC3D-201ENST00000216099 RIPK4P57078 832 aa13.57□□□□□ -0.24
APOBEC3D-201ENST00000216099 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
APOBEC3D-201ENST00000216099 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
APOBEC3D-201ENST00000216099 NFE2L2Q16236 605 aa13.57□□□□□ -0.24
APOBEC3D-201ENST00000216099 PROSER2Q86WR7 435 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3D-201ENST00000216099 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
APOBEC3D-201ENST00000216099 DEKP35659 375 aaKnown RBP13.56□□□□□ -0.24
APOBEC3D-201ENST00000216099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
APOBEC3D-201ENST00000216099 FBLN1P23142 703 aa13.55□□□□□ -0.24
APOBEC3D-201ENST00000216099 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
APOBEC3D-201ENST00000216099 KCNA6P17658 529 aa13.55□□□□□ -0.24
APOBEC3D-201ENST00000216099 CANXP27824 592 aaKnown RBP13.54□□□□□ -0.24
APOBEC3D-201ENST00000216099 IGSF5Q9NSI5 407 aa13.54□□□□□ -0.24
APOBEC3D-201ENST00000216099 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
APOBEC3D-201ENST00000216099 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
APOBEC3D-201ENST00000216099 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
APOBEC3D-201ENST00000216099 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
APOBEC3D-201ENST00000216099 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
APOBEC3D-201ENST00000216099 LTN1O94822 1766 aa13.52□□□□□ -0.24
APOBEC3D-201ENST00000216099 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.25
APOBEC3D-201ENST00000216099 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
APOBEC3D-201ENST00000216099 PSMD1Q99460 953 aa13.52□□□□□ -0.25
APOBEC3D-201ENST00000216099 PHRF1Q9P1Y6 1649 aaKnown RBP13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 SBNO1A3KN83 1393 aa13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 ARHGEF10O15013 1369 aa13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 HMOX1P09601 288 aa13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 MLLT3P42568 568 aaPredicted RBP13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 NGDNQ8NEJ9 315 aaKnown RBP13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
APOBEC3D-201ENST00000216099 EIF4A2Q14240 407 aaKnown RBP13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 IFT57Q9NWB7 429 aa13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 FLT4P35916 1363 aa13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 ALDH1L2Q3SY69 923 aa13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 PLSCR2Q9NRY7 297 aa13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 KIAA1522Q9P206 1035 aaPredicted RBP13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 SERPINA10Q9UK55 444 aa13.5□□□□□ -0.25
APOBEC3D-201ENST00000216099 FRAT1Q92837 279 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3D-201ENST00000216099 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
APOBEC3D-201ENST00000216099 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
APOBEC3D-201ENST00000216099 GNAI1P63096 354 aa13.49□□□□□ -0.25
APOBEC3D-201ENST00000216099 E2F4Q16254 413 aa13.49□□□□□ -0.25
APOBEC3D-201ENST00000216099 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
APOBEC3D-201ENST00000216099 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
APOBEC3D-201ENST00000216099 COG6Q9Y2V7 657 aa13.48□□□□□ -0.25
APOBEC3D-201ENST00000216099 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
APOBEC3D-201ENST00000216099 KIF16BQ96L93 1317 aa13.47□□□□□ -0.25
APOBEC3D-201ENST00000216099 SMC4Q9NTJ3 1288 aa13.47□□□□□ -0.25
APOBEC3D-201ENST00000216099 LRRC37A3O60309 1634 aa13.47□□□□□ -0.25
APOBEC3D-201ENST00000216099 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
APOBEC3D-201ENST00000216099 RLBP1P12271 317 aa13.47□□□□□ -0.25
APOBEC3D-201ENST00000216099 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
APOBEC3D-201ENST00000216099 MVPQ14764 893 aaKnown RBP13.46□□□□□ -0.25
APOBEC3D-201ENST00000216099 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.25
APOBEC3D-201ENST00000216099 SSH1Q8WYL5 1049 aa13.46□□□□□ -0.25
APOBEC3D-201ENST00000216099 KDRP35968 1356 aa13.46□□□□□ -0.25
APOBEC3D-201ENST00000216099 PDE4AP27815 886 aa13.46□□□□□ -0.26
APOBEC3D-201ENST00000216099 BCL2L13Q9BXK5 485 aa13.46□□□□□ -0.26
APOBEC3D-201ENST00000216099 RTL1A6NKG5 1358 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms