RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 STK31Q9BXU1 1019 aa18.55■□□□□ 0.56
EFNB1-201ENST00000204961 BAG4O95429 457 aaKnown RBP18.55■□□□□ 0.56
EFNB1-201ENST00000204961 MRE11P49959 708 aa18.55■□□□□ 0.56
EFNB1-201ENST00000204961 HECW2Q9P2P5 1572 aa18.55■□□□□ 0.56
EFNB1-201ENST00000204961 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
EFNB1-201ENST00000204961 PNMA6EA0A0J9YXQ4 647 aa18.54■□□□□ 0.56
EFNB1-201ENST00000204961 LTKP29376 864 aa18.54■□□□□ 0.56
EFNB1-201ENST00000204961 DCTPP1Q9H773 170 aa18.54■□□□□ 0.56
EFNB1-201ENST00000204961 TTC21BQ7Z4L5 1316 aa18.54■□□□□ 0.56
EFNB1-201ENST00000204961 TAOK2Q9UL54 1235 aa18.54■□□□□ 0.56
EFNB1-201ENST00000204961 MAP3K19Q56UN5 1328 aa18.53■□□□□ 0.56
EFNB1-201ENST00000204961 CASC1Q6TDU7 716 aa18.53■□□□□ 0.56
EFNB1-201ENST00000204961 RAB3GAP1Q15042 981 aa18.53■□□□□ 0.56
EFNB1-201ENST00000204961 ARHGEF28Q8N1W1 1705 aaKnown RBP18.53■□□□□ 0.56
EFNB1-201ENST00000204961 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
EFNB1-201ENST00000204961 ABCC4O15439 1325 aa18.53■□□□□ 0.56
EFNB1-201ENST00000204961 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
EFNB1-201ENST00000204961 INTS3Q68E01 1043 aaKnown RBP18.52■□□□□ 0.56
EFNB1-201ENST00000204961 PIK3C2BO00750 1634 aa18.52■□□□□ 0.56
EFNB1-201ENST00000204961 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.52■□□□□ 0.56
EFNB1-201ENST00000204961 PHAXQ9H814 394 aaKnown RBP18.52■□□□□ 0.56
EFNB1-201ENST00000204961 LRRFIP2Q9Y608 721 aaKnown RBP18.52■□□□□ 0.56
EFNB1-201ENST00000204961 ZC3H13Q5T200 1668 aaKnown RBP18.52■□□□□ 0.56
EFNB1-201ENST00000204961 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.56
EFNB1-201ENST00000204961 USP26Q9BXU7 913 aa18.52■□□□□ 0.55
EFNB1-201ENST00000204961 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.55
EFNB1-201ENST00000204961 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.55
EFNB1-201ENST00000204961 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
EFNB1-201ENST00000204961 CPA1P15085 419 aa18.51■□□□□ 0.55
EFNB1-201ENST00000204961 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
EFNB1-201ENST00000204961 OS9Q13438 667 aaPredicted RBP18.51■□□□□ 0.55
EFNB1-201ENST00000204961 ANKRD44Q8N8A2 993 aa18.51■□□□□ 0.55
EFNB1-201ENST00000204961 CHMP4BQ9H444 224 aaKnown RBP18.51■□□□□ 0.55
EFNB1-201ENST00000204961 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
EFNB1-201ENST00000204961 CHMP3Q9Y3E7 222 aa18.51■□□□□ 0.55
EFNB1-201ENST00000204961 UNC5CLQ8IV45 518 aa18.51■□□□□ 0.55
EFNB1-201ENST00000204961 ANP32BQ92688 251 aaKnown RBP18.51■□□□□ 0.55
EFNB1-201ENST00000204961 EYA1Q99502 592 aa18.51■□□□□ 0.55
EFNB1-201ENST00000204961 NSFL1CQ9UNZ2 370 aaKnown RBP18.51■□□□□ 0.55
EFNB1-201ENST00000204961 HSP90AA2PQ14568 343 aaPredicted RBP18.5■□□□□ 0.55
EFNB1-201ENST00000204961 IFT172Q9UG01 1749 aa18.5■□□□□ 0.55
EFNB1-201ENST00000204961 MAP2P11137 1827 aaKnown RBP18.5■□□□□ 0.55
EFNB1-201ENST00000204961 ESPNB1AK53 854 aa18.49■□□□□ 0.55
EFNB1-201ENST00000204961 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
EFNB1-201ENST00000204961 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
EFNB1-201ENST00000204961 FSD2A1L4K1 749 aa18.49■□□□□ 0.55
EFNB1-201ENST00000204961 AMOTL2Q9Y2J4 779 aa18.49■□□□□ 0.55
EFNB1-201ENST00000204961 CPS1P31327 1500 aa18.49■□□□□ 0.55
EFNB1-201ENST00000204961 SYCE3A1L190 88 aa18.48■□□□□ 0.55
EFNB1-201ENST00000204961 SURF6O75683 361 aaKnown RBP18.48■□□□□ 0.55
EFNB1-201ENST00000204961 ST18O60284 1047 aa18.48■□□□□ 0.55
EFNB1-201ENST00000204961 ARHGAP45Q92619 1136 aa18.48■□□□□ 0.55
EFNB1-201ENST00000204961 JARID2Q92833 1246 aaPredicted RBP18.48■□□□□ 0.55
EFNB1-201ENST00000204961 SNX21Q969T3 373 aa18.48■□□□□ 0.55
EFNB1-201ENST00000204961 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
EFNB1-201ENST00000204961 CHL1O00533 1208 aa18.47■□□□□ 0.55
EFNB1-201ENST00000204961 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
EFNB1-201ENST00000204961 PDE1AP54750 535 aa18.47■□□□□ 0.55
EFNB1-201ENST00000204961 AIMP1Q12904 312 aaKnown RBP18.47■□□□□ 0.55
EFNB1-201ENST00000204961 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
EFNB1-201ENST00000204961 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
EFNB1-201ENST00000204961 ARHGEF40Q8TER5 1519 aa18.46■□□□□ 0.55
EFNB1-201ENST00000204961 FLIIQ13045 1269 aa18.46■□□□□ 0.55
EFNB1-201ENST00000204961 KCNQ3O43525 872 aa18.46■□□□□ 0.55
EFNB1-201ENST00000204961 HMMRO75330 724 aa18.46■□□□□ 0.55
EFNB1-201ENST00000204961 RABEP1Q15276 862 aa18.45■□□□□ 0.54
EFNB1-201ENST00000204961 RBM10P98175 930 aaKnown RBP18.45■□□□□ 0.54
EFNB1-201ENST00000204961 BCL11BQ9C0K0 894 aaPredicted RBP18.45■□□□□ 0.54
EFNB1-201ENST00000204961 GNAI2P04899 355 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 PIP4K2AP48426 406 aaPredicted RBP18.44■□□□□ 0.54
EFNB1-201ENST00000204961 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
EFNB1-201ENST00000204961 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 DIP2CQ9Y2E4 1556 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 ERC2O15083 957 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
EFNB1-201ENST00000204961 IL25Q9H293 177 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 MYO3AQ8NEV4 1616 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
EFNB1-201ENST00000204961 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
EFNB1-201ENST00000204961 MPRIPQ6WCQ1 1025 aa18.43■□□□□ 0.54
EFNB1-201ENST00000204961 ZMYM3Q14202 1370 aa18.43■□□□□ 0.54
EFNB1-201ENST00000204961 CWC27Q6UX04 472 aaKnown RBP18.42■□□□□ 0.54
EFNB1-201ENST00000204961 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
EFNB1-201ENST00000204961 ZMYND15Q9H091 742 aa18.42■□□□□ 0.54
EFNB1-201ENST00000204961 PPFIA3O75145 1194 aa18.42■□□□□ 0.54
EFNB1-201ENST00000204961 REC8O95072 547 aa18.42■□□□□ 0.54
EFNB1-201ENST00000204961 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
EFNB1-201ENST00000204961 TMX3Q96JJ7 454 aa18.41■□□□□ 0.54
EFNB1-201ENST00000204961 TCEANC2Q96MN5 208 aa18.41■□□□□ 0.54
EFNB1-201ENST00000204961 MX1P20591 662 aa18.41■□□□□ 0.54
EFNB1-201ENST00000204961 RBSNQ9H1K0 784 aa18.41■□□□□ 0.54
EFNB1-201ENST00000204961 SRGAP3O43295 1099 aa18.41■□□□□ 0.54
EFNB1-201ENST00000204961 UBTFL1P0CB47 393 aaPredicted RBP18.41■□□□□ 0.54
EFNB1-201ENST00000204961 SIL1Q9H173 461 aa18.41■□□□□ 0.54
EFNB1-201ENST00000204961 ZFYVE9O95405 1425 aa18.4■□□□□ 0.54
EFNB1-201ENST00000204961 PTMAP06454 111 aaKnown RBP18.4■□□□□ 0.54
EFNB1-201ENST00000204961 ZSCAN23Q3MJ62 389 aa18.4■□□□□ 0.54
EFNB1-201ENST00000204961 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
EFNB1-201ENST00000204961 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms