RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 RBM33Q96EV2 1170 aaKnown RBP22.82■■□□□ 1.24
SLC22A4-201ENST00000200652 C1orf115Q9H7X2 142 aa22.82■■□□□ 1.24
SLC22A4-201ENST00000200652 RTF1Q92541 710 aaKnown RBP22.81■■□□□ 1.24
SLC22A4-201ENST00000200652 GAS2L2Q8NHY3 880 aa22.8■■□□□ 1.24
SLC22A4-201ENST00000200652 RTL5Q5HYW3 569 aaPredicted RBP22.8■■□□□ 1.24
SLC22A4-201ENST00000200652 NWD1Q149M9 1564 aa22.79■■□□□ 1.24
SLC22A4-201ENST00000200652 MIS18AQ9NYP9 233 aa22.79■■□□□ 1.24
SLC22A4-201ENST00000200652 CHD1LQ86WJ1 897 aa22.78■■□□□ 1.24
SLC22A4-201ENST00000200652 UPF2Q9HAU5 1272 aaKnown RBP22.78■■□□□ 1.24
SLC22A4-201ENST00000200652 ADGRL3Q9HAR2 1447 aa22.78■■□□□ 1.24
SLC22A4-201ENST00000200652 SIRT2Q8IXJ6 389 aa22.78■■□□□ 1.24
SLC22A4-201ENST00000200652 GCC1Q96CN9 775 aa22.78■■□□□ 1.24
SLC22A4-201ENST00000200652 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
SLC22A4-201ENST00000200652 C14orf37Q86TY3 774 aa22.77■■□□□ 1.24
SLC22A4-201ENST00000200652 LNPKQ9C0E8 428 aa22.77■■□□□ 1.24
SLC22A4-201ENST00000200652 RGS12O14924 1447 aa22.77■■□□□ 1.24
SLC22A4-201ENST00000200652 TBC1D32Q96NH3 1257 aa22.77■■□□□ 1.24
SLC22A4-201ENST00000200652 TSPYL4Q9UJ04 414 aa22.76■■□□□ 1.23
SLC22A4-201ENST00000200652 HTATSF1O43719 755 aaKnown RBP22.76■■□□□ 1.23
SLC22A4-201ENST00000200652 LTN1O94822 1766 aa22.75■■□□□ 1.23
SLC22A4-201ENST00000200652 NPHP4O75161 1426 aaPredicted RBP22.75■■□□□ 1.23
SLC22A4-201ENST00000200652 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
SLC22A4-201ENST00000200652 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
SLC22A4-201ENST00000200652 RTL1A6NKG5 1358 aa22.74■■□□□ 1.23
SLC22A4-201ENST00000200652 PTPRCP08575 1304 aa22.73■■□□□ 1.23
SLC22A4-201ENST00000200652 LRRC37A3O60309 1634 aa22.73■■□□□ 1.23
SLC22A4-201ENST00000200652 ANKRD45Q5TZF3 282 aa22.73■■□□□ 1.23
SLC22A4-201ENST00000200652 USP35Q9P2H5 1018 aa22.73■■□□□ 1.23
SLC22A4-201ENST00000200652 GNAT3A8MTJ3 354 aa22.72■■□□□ 1.23
SLC22A4-201ENST00000200652 SLC4A2P04920 1241 aa22.72■■□□□ 1.23
SLC22A4-201ENST00000200652 PSME1Q06323 249 aa22.72■■□□□ 1.23
SLC22A4-201ENST00000200652 NFAT5O94916 1531 aa22.71■■□□□ 1.23
SLC22A4-201ENST00000200652 DEKP35659 375 aaKnown RBP22.7■■□□□ 1.22
SLC22A4-201ENST00000200652 IP6K1Q92551 441 aa22.7■■□□□ 1.22
SLC22A4-201ENST00000200652 BECN1Q14457 450 aa22.69■■□□□ 1.22
SLC22A4-201ENST00000200652 MAP3K5Q99683 1374 aa22.68■■□□□ 1.22
SLC22A4-201ENST00000200652 IL17REQ8NFR9 667 aa22.67■■□□□ 1.22
SLC22A4-201ENST00000200652 MFAP1P55081 439 aaKnown RBP22.67■■□□□ 1.22
SLC22A4-201ENST00000200652 USHBP1Q8N6Y0 703 aa22.67■■□□□ 1.22
SLC22A4-201ENST00000200652 MSH6P52701 1360 aa22.67■■□□□ 1.22
SLC22A4-201ENST00000200652 G2E3Q7L622 706 aa22.66■■□□□ 1.22
SLC22A4-201ENST00000200652 BMP2KLQ5H9B9 411 aa22.66■■□□□ 1.22
SLC22A4-201ENST00000200652 KCNH5Q8NCM2 988 aa22.65■■□□□ 1.22
SLC22A4-201ENST00000200652 C22orf23Q9BZE7 217 aa22.65■■□□□ 1.22
SLC22A4-201ENST00000200652 DCTPP1Q9H773 170 aa22.65■■□□□ 1.22
SLC22A4-201ENST00000200652 ATP10DQ9P241 1426 aa22.65■■□□□ 1.22
SLC22A4-201ENST00000200652 ANKRD44Q8N8A2 993 aa22.65■■□□□ 1.22
SLC22A4-201ENST00000200652 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
SLC22A4-201ENST00000200652 NFKBIBQ15653 356 aa22.64■■□□□ 1.21
SLC22A4-201ENST00000200652 RPAP2Q8IXW5 612 aaPredicted RBP22.63■■□□□ 1.21
SLC22A4-201ENST00000200652 NBPF6Q5VWK0 638 aa22.63■■□□□ 1.21
SLC22A4-201ENST00000200652 NBPF4Q96M43 638 aa22.63■■□□□ 1.21
SLC22A4-201ENST00000200652 PHRF1Q9P1Y6 1649 aaKnown RBP22.63■■□□□ 1.21
SLC22A4-201ENST00000200652 TAF7Q15545 349 aaPredicted RBP22.62■■□□□ 1.21
SLC22A4-201ENST00000200652 MEIS3Q99687 375 aa22.62■■□□□ 1.21
SLC22A4-201ENST00000200652 BABAM1Q9NWV8 329 aa22.62■■□□□ 1.21
SLC22A4-201ENST00000200652 CEP85Q6P2H3 762 aa22.62■■□□□ 1.21
SLC22A4-201ENST00000200652 FAM208AQ9UK61 1670 aaKnown RBP22.61■■□□□ 1.21
SLC22A4-201ENST00000200652 STK31Q9BXU1 1019 aa22.61■■□□□ 1.21
SLC22A4-201ENST00000200652 RGPD2P0DJD1 1756 aa22.61■■□□□ 1.21
SLC22A4-201ENST00000200652 F6X3S4 739 aa22.6■■□□□ 1.21
SLC22A4-201ENST00000200652 TBC1D2Q9BYX2 928 aa22.6■■□□□ 1.21
SLC22A4-201ENST00000200652 ZBTB7CA1YPR0 619 aa22.59■■□□□ 1.21
SLC22A4-201ENST00000200652 XPCQ01831 940 aaPredicted RBP22.59■■□□□ 1.21
SLC22A4-201ENST00000200652 CCDC30Q5VVM6 783 aa22.59■■□□□ 1.21
SLC22A4-201ENST00000200652 SOS1Q07889 1333 aaPredicted RBP22.59■■□□□ 1.21
SLC22A4-201ENST00000200652 CCT4P50991 539 aaKnown RBP22.58■■□□□ 1.21
SLC22A4-201ENST00000200652 SLC4A10Q6U841 1118 aa22.58■■□□□ 1.21
SLC22A4-201ENST00000200652 GCP02774 474 aa22.58■■□□□ 1.2
SLC22A4-201ENST00000200652 PROSER2Q86WR7 435 aaPredicted RBP22.58■■□□□ 1.2
SLC22A4-201ENST00000200652 CACNA1FO60840 1977 aa22.58■■□□□ 1.2
SLC22A4-201ENST00000200652 SLIT3O75094 1523 aa22.57■■□□□ 1.2
SLC22A4-201ENST00000200652 CEMIPQ8WUJ3 1361 aa22.57■■□□□ 1.2
SLC22A4-201ENST00000200652 FLIIQ13045 1269 aa22.56■■□□□ 1.2
SLC22A4-201ENST00000200652 ARHGEF25Q86VW2 580 aa22.56■■□□□ 1.2
SLC22A4-201ENST00000200652 PLEKHM2Q8IWE5 1019 aa22.56■■□□□ 1.2
SLC22A4-201ENST00000200652 NECTIN2Q92692 538 aa22.55■■□□□ 1.2
SLC22A4-201ENST00000200652 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
SLC22A4-201ENST00000200652 TRPM3Q9HCF6 1732 aaPredicted RBP22.55■■□□□ 1.2
SLC22A4-201ENST00000200652 RBM25P49756 843 aaKnown RBP22.54■■□□□ 1.2
SLC22A4-201ENST00000200652 LGR6Q9HBX8 967 aa22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 MED1Q15648 1581 aaPredicted RBP22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 FKBP5Q13451 457 aaPredicted RBP22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 LMOD2Q6P5Q4 547 aa22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 TBC1D9Q6ZT07 1266 aa22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 KRT28Q7Z3Y7 464 aa22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 C16orf71Q8IYS4 520 aaPredicted RBP22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 SLKQ9H2G2 1235 aaPredicted RBP22.53■■□□□ 1.2
SLC22A4-201ENST00000200652 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
SLC22A4-201ENST00000200652 ANTXR1Q9H6X2 564 aa22.52■■□□□ 1.2
SLC22A4-201ENST00000200652 C1orf167Q5SNV9 1468 aa22.52■■□□□ 1.2
SLC22A4-201ENST00000200652 KIF1AQ12756 1690 aa22.52■■□□□ 1.2
SLC22A4-201ENST00000200652 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
SLC22A4-201ENST00000200652 GSPT1P15170 499 aaKnown RBP22.51■■□□□ 1.19
SLC22A4-201ENST00000200652 C19orf44Q9H6X5 657 aa22.51■■□□□ 1.19
SLC22A4-201ENST00000200652 FRAT2O75474 233 aaPredicted RBP22.51■■□□□ 1.19
SLC22A4-201ENST00000200652 NCAPD2Q15021 1401 aa22.5■■□□□ 1.19
SLC22A4-201ENST00000200652 HMMRO75330 724 aa22.5■■□□□ 1.19
SLC22A4-201ENST00000200652 KDM3BQ7LBC6 1761 aa22.49■■□□□ 1.19
SLC22A4-201ENST00000200652 GNAI2P04899 355 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms