RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 MCM3P25205 808 aa20.1■□□□□ 0.81
ITGB4-201ENST00000200181 AACSQ86V21 672 aa20.1■□□□□ 0.81
ITGB4-201ENST00000200181 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
ITGB4-201ENST00000200181 SFPQP23246 707 aaKnown RBP eCLIP20.1■□□□□ 0.81
ITGB4-201ENST00000200181 KRT32Q14532 448 aa20.1■□□□□ 0.81
ITGB4-201ENST00000200181 KIF5CO60282 957 aa20.09■□□□□ 0.81
ITGB4-201ENST00000200181 CAMK4Q16566 473 aa20.09■□□□□ 0.81
ITGB4-201ENST00000200181 ZNF76P36508 570 aa20.09■□□□□ 0.81
ITGB4-201ENST00000200181 FKBP4Q02790 459 aaKnown RBP eCLIP20.09■□□□□ 0.81
ITGB4-201ENST00000200181 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
ITGB4-201ENST00000200181 TDO2P48775 406 aa20.08■□□□□ 0.81
ITGB4-201ENST00000200181 CWC27Q6UX04 472 aaKnown RBP20.08■□□□□ 0.81
ITGB4-201ENST00000200181 MPHOSPH10O00566 681 aaKnown RBP20.08■□□□□ 0.8
ITGB4-201ENST00000200181 GPATCH11Q8N954 259 aa20.08■□□□□ 0.8
ITGB4-201ENST00000200181 IFFO1Q0D2I5 559 aa20.07■□□□□ 0.8
ITGB4-201ENST00000200181 MICALCLQ6ZW33 695 aa20.07■□□□□ 0.8
ITGB4-201ENST00000200181 KIF18AQ8NI77 898 aa20.07■□□□□ 0.8
ITGB4-201ENST00000200181 PPP1R12BO60237 982 aaPredicted RBP20.07■□□□□ 0.8
ITGB4-201ENST00000200181 CEP63Q96MT8 703 aa20.07■□□□□ 0.8
ITGB4-201ENST00000200181 RRBP1Q9P2E9 1410 aaKnown RBP20.06■□□□□ 0.8
ITGB4-201ENST00000200181 MVPQ14764 893 aaKnown RBP20.06■□□□□ 0.8
ITGB4-201ENST00000200181 ANAPC15P60006 121 aa20.06■□□□□ 0.8
ITGB4-201ENST00000200181 SMC1AQ14683 1233 aaKnown RBP20.06■□□□□ 0.8
ITGB4-201ENST00000200181 CGNQ9P2M7 1197 aaKnown RBP20.06■□□□□ 0.8
ITGB4-201ENST00000200181 RNF187Q5TA31 235 aaPredicted RBP20.06■□□□□ 0.8
ITGB4-201ENST00000200181 ABTB2Q8N961 1025 aa20.06■□□□□ 0.8
ITGB4-201ENST00000200181 LUZP1Q86V48 1076 aa20.06■□□□□ 0.8
ITGB4-201ENST00000200181 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
ITGB4-201ENST00000200181 URI1O94763 535 aaPredicted RBP20.06■□□□□ 0.8
ITGB4-201ENST00000200181 KIF4BQ2VIQ3 1234 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 GOPCQ9HD26 462 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 GCOM1H8Y6P7 765 aaPredicted RBP20.05■□□□□ 0.8
ITGB4-201ENST00000200181 MYZAPP0CAP1 466 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 CCDC178Q5BJE1 867 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 FKBP15Q5T1M5 1219 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 CALCOCO1Q9P1Z2 691 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 MYOM3Q5VTT5 1437 aa20.05■□□□□ 0.8
ITGB4-201ENST00000200181 TMEM132EQ6IEE7 984 aa20.04■□□□□ 0.8
ITGB4-201ENST00000200181 PNISRQ8TF01 805 aaKnown RBP20.04■□□□□ 0.8
ITGB4-201ENST00000200181 MPHOSPH8Q99549 860 aa20.04■□□□□ 0.8
ITGB4-201ENST00000200181 POLR3GO15318 223 aaPredicted RBP20.04■□□□□ 0.8
ITGB4-201ENST00000200181 TRIM21P19474 475 aaKnown RBP20.04■□□□□ 0.8
ITGB4-201ENST00000200181 PIBF1Q8WXW3 757 aa20.04■□□□□ 0.8
ITGB4-201ENST00000200181 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
ITGB4-201ENST00000200181 ATF7IPQ6VMQ6 1270 aa20.04■□□□□ 0.8
ITGB4-201ENST00000200181 CASTP20810 708 aaKnown RBP20.04■□□□□ 0.8
ITGB4-201ENST00000200181 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
ITGB4-201ENST00000200181 GSTTP1A0A1W2PQM5 241 aa20.03■□□□□ 0.8
ITGB4-201ENST00000200181 ANO10Q9NW15 660 aa20.03■□□□□ 0.8
ITGB4-201ENST00000200181 TATP17735 454 aaPredicted RBP20.03■□□□□ 0.8
ITGB4-201ENST00000200181 RBM25P49756 843 aaKnown RBP20.03■□□□□ 0.8
ITGB4-201ENST00000200181 IPO4Q8TEX9 1081 aaKnown RBP20.03■□□□□ 0.8
ITGB4-201ENST00000200181 FAM107BQ9H098 131 aa20.03■□□□□ 0.8
ITGB4-201ENST00000200181 AKNAQ7Z591 1439 aa20.03■□□□□ 0.8
ITGB4-201ENST00000200181 BCCIPQ9P287 314 aaKnown RBP eCLIP20.03■□□□□ 0.8
ITGB4-201ENST00000200181 ZNF428Q96B54 188 aa20.03■□□□□ 0.8
ITGB4-201ENST00000200181 SCAPERQ9BY12 1400 aa20.02■□□□□ 0.8
ITGB4-201ENST00000200181 TSG101Q99816 390 aa20.02■□□□□ 0.8
ITGB4-201ENST00000200181 TOP1P11387 765 aaKnown RBP20.02■□□□□ 0.8
ITGB4-201ENST00000200181 UBE4AQ14139 1066 aa20.02■□□□□ 0.8
ITGB4-201ENST00000200181 CACNA2D4Q7Z3S7 1137 aa20.02■□□□□ 0.8
ITGB4-201ENST00000200181 CABP4P57796 275 aa20.02■□□□□ 0.79
ITGB4-201ENST00000200181 RAI14Q9P0K7 980 aa20.02■□□□□ 0.79
ITGB4-201ENST00000200181 PTPRGP23470 1445 aa20.02■□□□□ 0.79
ITGB4-201ENST00000200181 CCDC183Q5T5S1 534 aa20.01■□□□□ 0.79
ITGB4-201ENST00000200181 SRGAP3O43295 1099 aa20.01■□□□□ 0.79
ITGB4-201ENST00000200181 USP5P45974 858 aa20.01■□□□□ 0.79
ITGB4-201ENST00000200181 VPS36Q86VN1 386 aa20.01■□□□□ 0.79
ITGB4-201ENST00000200181 MYL6BP14649 208 aa20■□□□□ 0.79
ITGB4-201ENST00000200181 CLIP2Q9UDT6 1046 aa20■□□□□ 0.79
ITGB4-201ENST00000200181 WDR63Q8IWG1 891 aa20■□□□□ 0.79
ITGB4-201ENST00000200181 PPM1EQ8WY54 764 aa20■□□□□ 0.79
ITGB4-201ENST00000200181 PAFAH1B1P43034 410 aa19.99■□□□□ 0.79
ITGB4-201ENST00000200181 XPCQ01831 940 aaPredicted RBP19.99■□□□□ 0.79
ITGB4-201ENST00000200181 KLHL10Q6JEL2 608 aa19.99■□□□□ 0.79
ITGB4-201ENST00000200181 ZSCAN29Q8IWY8 852 aaPredicted RBP19.99■□□□□ 0.79
ITGB4-201ENST00000200181 CCDC175P0C221 793 aa19.99■□□□□ 0.79
ITGB4-201ENST00000200181 GTF2F1P35269 517 aaKnown RBP eCLIP19.99■□□□□ 0.79
ITGB4-201ENST00000200181 CCDC83Q8IWF9 413 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 DNAI2Q9GZS0 605 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 IL1RAPL2Q9NP60 686 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 SULT6B1Q6IMI4 303 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 ZHX1Q9UKY1 873 aaPredicted RBP19.98■□□□□ 0.79
ITGB4-201ENST00000200181 USO1O60763 962 aaKnown RBP19.98■□□□□ 0.79
ITGB4-201ENST00000200181 CTNNBL1Q8WYA6 563 aaPredicted RBP19.98■□□□□ 0.79
ITGB4-201ENST00000200181 FERMT3Q86UX7 667 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 TMX1Q9H3N1 280 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 CEP126Q9P2H0 1117 aa19.98■□□□□ 0.79
ITGB4-201ENST00000200181 POTEB2H3BUK9 544 aa19.97■□□□□ 0.79
ITGB4-201ENST00000200181 LARP1Q6PKG0 1096 aaKnown RBP19.97■□□□□ 0.79
ITGB4-201ENST00000200181 HOOK3Q86VS8 718 aa19.97■□□□□ 0.79
ITGB4-201ENST00000200181 TNNT1P13805 278 aa19.97■□□□□ 0.79
ITGB4-201ENST00000200181 DNA2P51530 1060 aa19.97■□□□□ 0.79
ITGB4-201ENST00000200181 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
ITGB4-201ENST00000200181 ESCO1Q5FWF5 840 aa19.97■□□□□ 0.79
ITGB4-201ENST00000200181 LRP2BPQ9P2M1 347 aa19.97■□□□□ 0.79
ITGB4-201ENST00000200181 AIDAQ96BJ3 306 aa19.96■□□□□ 0.79
ITGB4-201ENST00000200181 FYCO1Q9BQS8 1478 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms