RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 MAP3K5Q99683 1374 aa20.12■□□□□ 0.81
LAPTM4A-201ENST00000175091 ANKRD24Q8TF21 1146 aa20.11■□□□□ 0.81
LAPTM4A-201ENST00000175091 SSH1Q8WYL5 1049 aa20.11■□□□□ 0.81
LAPTM4A-201ENST00000175091 AXIN2Q9Y2T1 843 aa20.11■□□□□ 0.81
LAPTM4A-201ENST00000175091 HTATSF1O43719 755 aaKnown RBP20.11■□□□□ 0.81
LAPTM4A-201ENST00000175091 FRAT1Q92837 279 aaPredicted RBP20.11■□□□□ 0.81
LAPTM4A-201ENST00000175091 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
LAPTM4A-201ENST00000175091 SMC4Q9NTJ3 1288 aa20.11■□□□□ 0.81
LAPTM4A-201ENST00000175091 ZC3H6P61129 1189 aaKnown RBP20.1■□□□□ 0.81
LAPTM4A-201ENST00000175091 ALDH1L2Q3SY69 923 aa20.1■□□□□ 0.81
LAPTM4A-201ENST00000175091 ROBO1Q9Y6N7 1651 aa20.09■□□□□ 0.81
LAPTM4A-201ENST00000175091 CHL1O00533 1208 aa20.08■□□□□ 0.81
LAPTM4A-201ENST00000175091 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
LAPTM4A-201ENST00000175091 KIF16BQ96L93 1317 aa20.08■□□□□ 0.8
LAPTM4A-201ENST00000175091 CABLES1Q8TDN4 633 aa20.08■□□□□ 0.8
LAPTM4A-201ENST00000175091 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
LAPTM4A-201ENST00000175091 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
LAPTM4A-201ENST00000175091 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
LAPTM4A-201ENST00000175091 VAMP4O75379 141 aa20.06■□□□□ 0.8
LAPTM4A-201ENST00000175091 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
LAPTM4A-201ENST00000175091 TSPYL6Q8N831 410 aa20.06■□□□□ 0.8
LAPTM4A-201ENST00000175091 KIAA0232Q92628 1395 aa20.06■□□□□ 0.8
LAPTM4A-201ENST00000175091 AHDC1Q5TGY3 1603 aaPredicted RBP20.06■□□□□ 0.8
LAPTM4A-201ENST00000175091 TNNQ9UQP3 1299 aa20.06■□□□□ 0.8
LAPTM4A-201ENST00000175091 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
LAPTM4A-201ENST00000175091 RLBP1P12271 317 aa20.05■□□□□ 0.8
LAPTM4A-201ENST00000175091 TWISTNBQ3B726 338 aaPredicted RBP20.05■□□□□ 0.8
LAPTM4A-201ENST00000175091 C8orf58Q8NAV2 365 aa20.04■□□□□ 0.8
LAPTM4A-201ENST00000175091 KDM3BQ7LBC6 1761 aa20.04■□□□□ 0.8
LAPTM4A-201ENST00000175091 CEMIPQ8WUJ3 1361 aa20.04■□□□□ 0.8
LAPTM4A-201ENST00000175091 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
LAPTM4A-201ENST00000175091 PLEKHG2Q9H7P9 1386 aa20.03■□□□□ 0.8
LAPTM4A-201ENST00000175091 TRIM27P14373 513 aa20.03■□□□□ 0.8
LAPTM4A-201ENST00000175091 PKD1L3Q7Z443 1732 aa20.03■□□□□ 0.8
LAPTM4A-201ENST00000175091 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
LAPTM4A-201ENST00000175091 MS4A1P11836 297 aa20.02■□□□□ 0.8
LAPTM4A-201ENST00000175091 ATF7IPQ6VMQ6 1270 aa20.02■□□□□ 0.8
LAPTM4A-201ENST00000175091 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.79
LAPTM4A-201ENST00000175091 SIPA1L3O60292 1781 aaPredicted RBP20.01■□□□□ 0.79
LAPTM4A-201ENST00000175091 COL22A1Q8NFW1 1626 aaPredicted RBP20.01■□□□□ 0.79
LAPTM4A-201ENST00000175091 AMOTQ4VCS5 1084 aa20■□□□□ 0.79
LAPTM4A-201ENST00000175091 DZIP1LQ8IYY4 767 aaKnown RBP20■□□□□ 0.79
LAPTM4A-201ENST00000175091 IL17REQ8NFR9 667 aa20■□□□□ 0.79
LAPTM4A-201ENST00000175091 TSHZ2Q9NRE2 1034 aa20■□□□□ 0.79
LAPTM4A-201ENST00000175091 NOB1Q9ULX3 412 aaKnown RBP20■□□□□ 0.79
LAPTM4A-201ENST00000175091 AAMPQ13685 434 aa20■□□□□ 0.79
LAPTM4A-201ENST00000175091 FTSJ3Q8IY81 847 aaKnown RBP20■□□□□ 0.79
LAPTM4A-201ENST00000175091 MRPL50Q8N5N7 158 aaKnown RBP20■□□□□ 0.79
LAPTM4A-201ENST00000175091 CLUAP1Q96AJ1 413 aa20■□□□□ 0.79
LAPTM4A-201ENST00000175091 MEGF6O75095 1541 aa19.99■□□□□ 0.79
LAPTM4A-201ENST00000175091 ELL2O00472 640 aaPredicted RBP19.99■□□□□ 0.79
LAPTM4A-201ENST00000175091 HAP1P54257 671 aaPredicted RBP19.99■□□□□ 0.79
LAPTM4A-201ENST00000175091 MVPQ14764 893 aaKnown RBP19.99■□□□□ 0.79
LAPTM4A-201ENST00000175091 CHRNA2Q15822 529 aa19.99■□□□□ 0.79
LAPTM4A-201ENST00000175091 PLEKHO1Q53GL0 409 aaPredicted RBP19.99■□□□□ 0.79
LAPTM4A-201ENST00000175091 TSPYL4Q9UJ04 414 aa19.99■□□□□ 0.79
LAPTM4A-201ENST00000175091 PARP4Q9UKK3 1724 aaKnown RBP19.98■□□□□ 0.79
LAPTM4A-201ENST00000175091 IPO8O15397 1037 aaKnown RBP19.98■□□□□ 0.79
LAPTM4A-201ENST00000175091 KRT24Q2M2I5 525 aa19.98■□□□□ 0.79
LAPTM4A-201ENST00000175091 AKAP4Q5JQC9 854 aa19.98■□□□□ 0.79
LAPTM4A-201ENST00000175091 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
LAPTM4A-201ENST00000175091 COL5A2P05997 1499 aaPredicted RBP19.97■□□□□ 0.79
LAPTM4A-201ENST00000175091 ZNF530Q6P9A1 599 aaPredicted RBP19.97■□□□□ 0.79
LAPTM4A-201ENST00000175091 SCN11AQ9UI33 1791 aa19.97■□□□□ 0.79
LAPTM4A-201ENST00000175091 ARHGAP45Q92619 1136 aa19.96■□□□□ 0.79
LAPTM4A-201ENST00000175091 CENPQQ7L2Z9 268 aaPredicted RBP19.95■□□□□ 0.78
LAPTM4A-201ENST00000175091 NLRP2Q9NX02 1062 aa19.95■□□□□ 0.78
LAPTM4A-201ENST00000175091 MIS18AQ9NYP9 233 aa19.95■□□□□ 0.78
LAPTM4A-201ENST00000175091 PRDM11Q9NQV5 511 aa19.95■□□□□ 0.78
LAPTM4A-201ENST00000175091 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
LAPTM4A-201ENST00000175091 TAF7Q15545 349 aaPredicted RBP19.93■□□□□ 0.78
LAPTM4A-201ENST00000175091 COL16A1Q07092 1604 aaPredicted RBP19.93■□□□□ 0.78
LAPTM4A-201ENST00000175091 CSB-PGBD3P0DP91 1061 aa19.93■□□□□ 0.78
LAPTM4A-201ENST00000175091 RAPGEF4Q8WZA2 1011 aa19.93■□□□□ 0.78
LAPTM4A-201ENST00000175091 ABCC4O15439 1325 aa19.92■□□□□ 0.78
LAPTM4A-201ENST00000175091 WDR17Q8IZU2 1322 aa19.92■□□□□ 0.78
LAPTM4A-201ENST00000175091 PHLPP1O60346 1717 aa19.92■□□□□ 0.78
LAPTM4A-201ENST00000175091 C1orf141Q5JVX7 400 aa19.92■□□□□ 0.78
LAPTM4A-201ENST00000175091 DDX19BQ9UMR2 479 aa19.92■□□□□ 0.78
LAPTM4A-201ENST00000175091 SOS1Q07889 1333 aaPredicted RBP19.91■□□□□ 0.78
LAPTM4A-201ENST00000175091 TMEM57Q8N5G2 664 aa19.91■□□□□ 0.78
LAPTM4A-201ENST00000175091 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
LAPTM4A-201ENST00000175091 COL14A1Q05707 1796 aaKnown RBP19.91■□□□□ 0.78
LAPTM4A-201ENST00000175091 RGS12O14924 1447 aa19.91■□□□□ 0.78
LAPTM4A-201ENST00000175091 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
LAPTM4A-201ENST00000175091 ITPRIPQ8IWB1 547 aa19.9■□□□□ 0.78
LAPTM4A-201ENST00000175091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.9■□□□□ 0.78
LAPTM4A-201ENST00000175091 TATP17735 454 aaPredicted RBP19.9■□□□□ 0.78
LAPTM4A-201ENST00000175091 MRC1P22897 1456 aa19.89■□□□□ 0.78
LAPTM4A-201ENST00000175091 SHANK3Q9BYB0 1731 aa19.89■□□□□ 0.78
LAPTM4A-201ENST00000175091 N4BP2Q86UW6 1770 aaPredicted RBP19.89■□□□□ 0.77
LAPTM4A-201ENST00000175091 RNMTO43148 476 aaKnown RBP19.89■□□□□ 0.77
LAPTM4A-201ENST00000175091 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.77
LAPTM4A-201ENST00000175091 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
LAPTM4A-201ENST00000175091 API5Q9BZZ5 524 aaKnown RBP19.88■□□□□ 0.77
LAPTM4A-201ENST00000175091 TEFQ10587 303 aa19.87■□□□□ 0.77
LAPTM4A-201ENST00000175091 PCDHB15Q9Y5E8 787 aa19.87■□□□□ 0.77
LAPTM4A-201ENST00000175091 SPG7Q9UQ90 795 aa19.86■□□□□ 0.77
LAPTM4A-201ENST00000175091 PTPRCP08575 1304 aa19.86■□□□□ 0.77
LAPTM4A-201ENST00000175091 IGHDP01880 384 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms