RNA–Protein interactions for RNA: ENST00000022615.8

VDAC3-201, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VDAC3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-201ENST00000022615 WNK3Q9BYP7 1800 aa8.63□□□□□ -1.03
VDAC3-201ENST00000022615 PKD1L3Q7Z443 1732 aa8.63□□□□□ -1.03
VDAC3-201ENST00000022615 CNTNAP1P78357 1384 aa8.62□□□□□ -1.03
VDAC3-201ENST00000022615 ANKRD30AQ9BXX3 1397 aa8.62□□□□□ -1.03
VDAC3-201ENST00000022615 ZC3H6P61129 1189 aaKnown RBP8.62□□□□□ -1.03
VDAC3-201ENST00000022615 RBM42Q9BTD8 480 aaKnown RBP8.62□□□□□ -1.03
VDAC3-201ENST00000022615 DAPK1P53355 1430 aa8.62□□□□□ -1.03
VDAC3-201ENST00000022615 COL5A2P05997 1499 aaPredicted RBP8.62□□□□□ -1.03
VDAC3-201ENST00000022615 GSE1Q14687 1217 aa8.61□□□□□ -1.03
VDAC3-201ENST00000022615 CREBZFQ9NS37 354 aa8.61□□□□□ -1.03
VDAC3-201ENST00000022615 CRB1P82279 1406 aa8.61□□□□□ -1.03
VDAC3-201ENST00000022615 KDM2BQ8NHM5 1336 aa8.61□□□□□ -1.03
VDAC3-201ENST00000022615 BTAF1O14981 1849 aa8.61□□□□□ -1.03
VDAC3-201ENST00000022615 HABP4Q5JVS0 413 aaKnown RBP8.61□□□□□ -1.03
VDAC3-201ENST00000022615 TFCP2L1Q9NZI6 479 aa8.61□□□□□ -1.03
VDAC3-201ENST00000022615 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
VDAC3-201ENST00000022615 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
VDAC3-201ENST00000022615 SZT2Q5T011 3432 aa8.6□□□□□ -1.03
VDAC3-201ENST00000022615 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
VDAC3-201ENST00000022615 TRPM1Q7Z4N2 1603 aa8.59□□□□□ -1.03
VDAC3-201ENST00000022615 KNDC1Q76NI1 1749 aa8.59□□□□□ -1.03
VDAC3-201ENST00000022615 C9orf131Q5VYM1 1079 aa8.59□□□□□ -1.03
VDAC3-201ENST00000022615 QRICH2Q9H0J4 1663 aa8.58□□□□□ -1.04
VDAC3-201ENST00000022615 CPDO75976 1380 aa8.58□□□□□ -1.04
VDAC3-201ENST00000022615 VEGFBP49765 207 aa8.58□□□□□ -1.04
VDAC3-201ENST00000022615 COL23A1Q86Y22 540 aaPredicted RBP8.58□□□□□ -1.04
VDAC3-201ENST00000022615 GPRASP1Q5JY77 1395 aa8.57□□□□□ -1.04
VDAC3-201ENST00000022615 ABCC11Q96J66 1382 aa8.57□□□□□ -1.04
VDAC3-201ENST00000022615 ANKRD30BQ9BXX2 1392 aa8.57□□□□□ -1.04
VDAC3-201ENST00000022615 ANKRD50Q9ULJ7 1429 aa8.57□□□□□ -1.04
VDAC3-201ENST00000022615 GTPBP6O43824 516 aaPredicted RBP8.57□□□□□ -1.04
VDAC3-201ENST00000022615 SPDYE1Q8NFV5 336 aaPredicted RBP8.57□□□□□ -1.04
VDAC3-201ENST00000022615 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
VDAC3-201ENST00000022615 MCOLN1Q9GZU1 580 aa8.57□□□□□ -1.04
VDAC3-201ENST00000022615 CHIC2Q9UKJ5 165 aa8.57□□□□□ -1.04
VDAC3-201ENST00000022615 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
VDAC3-201ENST00000022615 PIK3C2AO00443 1686 aa8.56□□□□□ -1.04
VDAC3-201ENST00000022615 KIAA1551Q9HCM1 1747 aa8.56□□□□□ -1.04
VDAC3-201ENST00000022615 VGFO15240 615 aaPredicted RBP8.56□□□□□ -1.04
VDAC3-201ENST00000022615 FXR1P51114 621 aaKnown RBP eCLIP8.56□□□□□ -1.04
VDAC3-201ENST00000022615 SLC27A3Q5K4L6 730 aa8.56□□□□□ -1.04
VDAC3-201ENST00000022615 RNF25Q96BH1 459 aaPredicted RBP8.56□□□□□ -1.04
VDAC3-201ENST00000022615 RYDENQ9NUL5 291 aaKnown RBP8.56□□□□□ -1.04
VDAC3-201ENST00000022615 ADAMTS7Q9UKP4 1686 aa8.55□□□□□ -1.04
VDAC3-201ENST00000022615 USP6P35125 1406 aa8.55□□□□□ -1.04
VDAC3-201ENST00000022615 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
VDAC3-201ENST00000022615 NKX1-1Q15270 411 aaPredicted RBP8.55□□□□□ -1.04
VDAC3-201ENST00000022615 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
VDAC3-201ENST00000022615 STK26Q9P289 416 aa8.55□□□□□ -1.04
VDAC3-201ENST00000022615 COL6A3P12111 3177 aa8.55□□□□□ -1.04
VDAC3-201ENST00000022615 COL18A1P39060 1754 aa8.55□□□□□ -1.04
VDAC3-201ENST00000022615 HOMEZQ8IX15 550 aa8.54□□□□□ -1.04
VDAC3-201ENST00000022615 ACSBG1Q96GR2 724 aa8.54□□□□□ -1.04
VDAC3-201ENST00000022615 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
VDAC3-201ENST00000022615 PAK3O75914 559 aaPredicted RBP8.52□□□□□ -1.05
VDAC3-201ENST00000022615 VEGFAP15692 232 aaPredicted RBP8.52□□□□□ -1.05
VDAC3-201ENST00000022615 SOX10P56693 466 aa8.52□□□□□ -1.05
VDAC3-201ENST00000022615 KCNQ4P56696 695 aa8.52□□□□□ -1.05
VDAC3-201ENST00000022615 MPNDQ8N594 471 aa8.52□□□□□ -1.05
VDAC3-201ENST00000022615 SLC17A8Q8NDX2 589 aa8.52□□□□□ -1.05
VDAC3-201ENST00000022615 PRR36Q9H6K5 1346 aa8.51□□□□□ -1.05
VDAC3-201ENST00000022615 USP54Q70EL1 1684 aa8.51□□□□□ -1.05
VDAC3-201ENST00000022615 SPATA31E1Q6ZUB1 1445 aa8.5□□□□□ -1.05
VDAC3-201ENST00000022615 MAP2K1Q02750 393 aaPredicted RBP8.5□□□□□ -1.05
VDAC3-201ENST00000022615 BCS1LQ9Y276 419 aa8.5□□□□□ -1.05
VDAC3-201ENST00000022615 KIF1BO60333 1816 aa8.5□□□□□ -1.05
VDAC3-201ENST00000022615 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
VDAC3-201ENST00000022615 PPLO60437 1756 aa8.5□□□□□ -1.05
VDAC3-201ENST00000022615 N4BP2Q86UW6 1770 aaPredicted RBP8.5□□□□□ -1.05
VDAC3-201ENST00000022615 LY75O60449 1722 aa8.5□□□□□ -1.05
VDAC3-201ENST00000022615 THSD7BQ9C0I4 1608 aa8.5□□□□□ -1.05
VDAC3-201ENST00000022615 NUTM2GQ5VZR2 741 aa8.49□□□□□ -1.05
VDAC3-201ENST00000022615 SIRT1Q96EB6 747 aa8.49□□□□□ -1.05
VDAC3-201ENST00000022615 RNF181Q9P0P0 153 aa8.49□□□□□ -1.05
VDAC3-201ENST00000022615 SBF1O95248 1867 aa8.49□□□□□ -1.05
VDAC3-201ENST00000022615 BRCA1P38398 1863 aaKnown RBP8.49□□□□□ -1.05
VDAC3-201ENST00000022615 MEGF6O75095 1541 aa8.49□□□□□ -1.05
VDAC3-201ENST00000022615 ABCC6O95255 1503 aa8.49□□□□□ -1.05
VDAC3-201ENST00000022615 ARFGEF1Q9Y6D6 1849 aa8.49□□□□□ -1.05
VDAC3-201ENST00000022615 POTECB2RU33 542 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 EXOC5O00471 708 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 STK25O00506 426 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 TOM1L2Q6ZVM7 507 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 LTBP1Q14766 1721 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 PASKQ96RG2 1323 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 PRR29P0C7W0 189 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 CLEC11AQ9Y240 323 aa8.48□□□□□ -1.05
VDAC3-201ENST00000022615 YTHDC2Q9H6S0 1430 aaKnown RBP8.47□□□□□ -1.05
VDAC3-201ENST00000022615 TMEM132EQ6IEE7 984 aa8.47□□□□□ -1.05
VDAC3-201ENST00000022615 REM2Q8IYK8 340 aaPredicted RBP8.47□□□□□ -1.05
VDAC3-201ENST00000022615 MKI67P46013 3256 aaKnown RBP8.47□□□□□ -1.05
VDAC3-201ENST00000022615 CASP8AP2Q9UKL3 1982 aa8.46□□□□□ -1.05
VDAC3-201ENST00000022615 RPGRIP1LQ68CZ1 1315 aa8.46□□□□□ -1.06
VDAC3-201ENST00000022615 WDR17Q8IZU2 1322 aa8.46□□□□□ -1.06
VDAC3-201ENST00000022615 ZC3H4Q9UPT8 1303 aaKnown RBP8.46□□□□□ -1.06
VDAC3-201ENST00000022615 GLTPD2A6NH11 291 aa8.46□□□□□ -1.06
VDAC3-201ENST00000022615 RASSF10A6NK89 507 aa8.46□□□□□ -1.06
VDAC3-201ENST00000022615 DGKZQ13574 1117 aa8.46□□□□□ -1.06
VDAC3-201ENST00000022615 CHADLQ6NUI6 762 aa8.46□□□□□ -1.06
VDAC3-201ENST00000022615 VPS8Q8N3P4 1428 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms