RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 PLIN1O60240 522 aa13.61□□□□□ -0.23
CD4-201ENST00000011653 C8orf37Q96NL8 207 aa13.61□□□□□ -0.23
CD4-201ENST00000011653 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
CD4-201ENST00000011653 TCERG1O14776 1098 aaKnown RBP13.61□□□□□ -0.23
CD4-201ENST00000011653 SLFN5Q08AF3 891 aa13.61□□□□□ -0.23
CD4-201ENST00000011653 DUSP27Q5VZP5 1158 aa13.6□□□□□ -0.23
CD4-201ENST00000011653 ZNF530Q6P9A1 599 aaPredicted RBP13.6□□□□□ -0.23
CD4-201ENST00000011653 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
CD4-201ENST00000011653 ALS2Q96Q42 1657 aa13.6□□□□□ -0.23
CD4-201ENST00000011653 E9PSI1 815 aa13.59□□□□□ -0.23
CD4-201ENST00000011653 MPRIPQ6WCQ1 1025 aa13.59□□□□□ -0.23
CD4-201ENST00000011653 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
CD4-201ENST00000011653 ZNF521Q96K83 1311 aa13.59□□□□□ -0.23
CD4-201ENST00000011653 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
CD4-201ENST00000011653 SLIT3O75094 1523 aa13.58□□□□□ -0.24
CD4-201ENST00000011653 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
CD4-201ENST00000011653 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
CD4-201ENST00000011653 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
CD4-201ENST00000011653 RGPD5Q99666 1765 aa13.57□□□□□ -0.24
CD4-201ENST00000011653 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
CD4-201ENST00000011653 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
CD4-201ENST00000011653 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
CD4-201ENST00000011653 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
CD4-201ENST00000011653 KIF24Q5T7B8 1368 aa13.56□□□□□ -0.24
CD4-201ENST00000011653 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
CD4-201ENST00000011653 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
CD4-201ENST00000011653 KRT24Q2M2I5 525 aa13.56□□□□□ -0.24
CD4-201ENST00000011653 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
CD4-201ENST00000011653 FRAT1Q92837 279 aaPredicted RBP13.56□□□□□ -0.24
CD4-201ENST00000011653 RGPD2P0DJD1 1756 aa13.56□□□□□ -0.24
CD4-201ENST00000011653 NBR1Q14596 966 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 MYH16Q9H6N6 1097 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 BCAR3O75815 825 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 TAOK2Q9UL54 1235 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 DEKP35659 375 aaKnown RBP13.55□□□□□ -0.24
CD4-201ENST00000011653 LMOD3Q0VAK6 560 aa13.55□□□□□ -0.24
CD4-201ENST00000011653 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
CD4-201ENST00000011653 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
CD4-201ENST00000011653 CAMTA1Q9Y6Y1 1673 aa13.54□□□□□ -0.24
CD4-201ENST00000011653 CANXP27824 592 aaKnown RBP13.54□□□□□ -0.24
CD4-201ENST00000011653 WDR17Q8IZU2 1322 aa13.54□□□□□ -0.24
CD4-201ENST00000011653 CCDC27Q2M243 656 aa13.53□□□□□ -0.24
CD4-201ENST00000011653 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
CD4-201ENST00000011653 CPDO75976 1380 aa13.53□□□□□ -0.24
CD4-201ENST00000011653 KDRP35968 1356 aa13.53□□□□□ -0.24
CD4-201ENST00000011653 MS4A1P11836 297 aa13.53□□□□□ -0.24
CD4-201ENST00000011653 NGEFQ8N5V2 710 aa13.53□□□□□ -0.24
CD4-201ENST00000011653 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
CD4-201ENST00000011653 PHF23Q9BUL5 403 aaPredicted RBP13.53□□□□□ -0.24
CD4-201ENST00000011653 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
CD4-201ENST00000011653 TSPYL4Q9UJ04 414 aa13.52□□□□□ -0.24
CD4-201ENST00000011653 TEFQ10587 303 aa13.52□□□□□ -0.25
CD4-201ENST00000011653 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
CD4-201ENST00000011653 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
CD4-201ENST00000011653 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
CD4-201ENST00000011653 GNAI1P63096 354 aa13.5□□□□□ -0.25
CD4-201ENST00000011653 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
CD4-201ENST00000011653 PDE4AP27815 886 aa13.5□□□□□ -0.25
CD4-201ENST00000011653 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
CD4-201ENST00000011653 TPRNQ4KMQ1 711 aa13.5□□□□□ -0.25
CD4-201ENST00000011653 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
CD4-201ENST00000011653 AHDC1Q5TGY3 1603 aaPredicted RBP13.49□□□□□ -0.25
CD4-201ENST00000011653 IL2RBP14784 551 aa13.49□□□□□ -0.25
CD4-201ENST00000011653 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
CD4-201ENST00000011653 AMOTQ4VCS5 1084 aa13.49□□□□□ -0.25
CD4-201ENST00000011653 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
CD4-201ENST00000011653 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
CD4-201ENST00000011653 JCADQ9P266 1359 aa13.49□□□□□ -0.25
CD4-201ENST00000011653 COL5A2P05997 1499 aaPredicted RBP13.49□□□□□ -0.25
CD4-201ENST00000011653 MAP3K5Q99683 1374 aa13.49□□□□□ -0.25
CD4-201ENST00000011653 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
CD4-201ENST00000011653 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
CD4-201ENST00000011653 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 SMC4Q9NTJ3 1288 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 MEGF6O75095 1541 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 COL16A1Q07092 1604 aaPredicted RBP13.48□□□□□ -0.25
CD4-201ENST00000011653 SLC39A6Q13433 755 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 TRMT2AQ8IZ69 625 aaKnown RBP13.48□□□□□ -0.25
CD4-201ENST00000011653 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 BACH2Q9BYV9 841 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 USP54Q70EL1 1684 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 CYP27B1O15528 508 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 KCNQ3O43525 872 aa13.48□□□□□ -0.25
CD4-201ENST00000011653 AKAP4Q5JQC9 854 aa13.47□□□□□ -0.25
CD4-201ENST00000011653 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
CD4-201ENST00000011653 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
CD4-201ENST00000011653 FAM98CQ17RN3 349 aaKnown RBP13.47□□□□□ -0.25
CD4-201ENST00000011653 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
CD4-201ENST00000011653 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
CD4-201ENST00000011653 USP21Q9UK80 565 aa13.46□□□□□ -0.25
CD4-201ENST00000011653 DLG5Q8TDM6 1919 aa13.46□□□□□ -0.25
CD4-201ENST00000011653 EIF2S2P20042 333 aaKnown RBP13.46□□□□□ -0.25
CD4-201ENST00000011653 TWISTNBQ3B726 338 aaPredicted RBP13.46□□□□□ -0.25
CD4-201ENST00000011653 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
CD4-201ENST00000011653 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms