RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ZSCAN23Q3MJ62 389 aa12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 CLEC17AQ6ZS10 378 aa12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 RBM27Q9P2N5 1060 aaKnown RBP12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
CX3CL1-201ENST00000006053 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
CX3CL1-201ENST00000006053 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
CX3CL1-201ENST00000006053 ARHGEF40Q8TER5 1519 aa12.9□□□□□ -0.34
CX3CL1-201ENST00000006053 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
CX3CL1-201ENST00000006053 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
CX3CL1-201ENST00000006053 COG3Q96JB2 828 aa12.9□□□□□ -0.34
CX3CL1-201ENST00000006053 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
CX3CL1-201ENST00000006053 CEP85Q6P2H3 762 aa12.9□□□□□ -0.34
CX3CL1-201ENST00000006053 RBSNQ9H1K0 784 aa12.9□□□□□ -0.34
CX3CL1-201ENST00000006053 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.35
CX3CL1-201ENST00000006053 MEIS3Q99687 375 aa12.9□□□□□ -0.35
CX3CL1-201ENST00000006053 TPM2P07951 284 aa12.89□□□□□ -0.35
CX3CL1-201ENST00000006053 ZNF445P59923 1031 aa12.89□□□□□ -0.35
CX3CL1-201ENST00000006053 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
CX3CL1-201ENST00000006053 MYO5BQ9ULV0 1848 aa12.89□□□□□ -0.35
CX3CL1-201ENST00000006053 MCM10Q7L590 875 aa12.89□□□□□ -0.35
CX3CL1-201ENST00000006053 RPAP2Q8IXW5 612 aaPredicted RBP12.89□□□□□ -0.35
CX3CL1-201ENST00000006053 PDCL3Q9H2J4 239 aa12.89□□□□□ -0.35
CX3CL1-201ENST00000006053 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 CEBPAP49715 358 aaPredicted RBP12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 ARHGAP31Q2M1Z3 1444 aa12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 NOL8Q76FK4 1167 aaKnown RBP12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 REC8O95072 547 aa12.88□□□□□ -0.35
CX3CL1-201ENST00000006053 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 MSH6P52701 1360 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 ALKQ9UM73 1620 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 ARID3AQ99856 593 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 ZDHHC9Q9Y397 364 aa12.87□□□□□ -0.35
CX3CL1-201ENST00000006053 ERC2O15083 957 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 SOX12O15370 315 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 NEK4P51957 841 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 SYCE3A1L190 88 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 OFD1O75665 1012 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
CX3CL1-201ENST00000006053 CLTCQ00610 1675 aaKnown RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 WASLO00401 505 aaPredicted RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 F6X3S4 739 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 NUDT16Q96DE0 195 aaKnown RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 XPCQ01831 940 aaPredicted RBP12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 TMEM63CQ9P1W3 806 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
CX3CL1-201ENST00000006053 ATP7BP35670 1465 aa12.84□□□□□ -0.35
CX3CL1-201ENST00000006053 TMEM131LA2VDJ0 1609 aa12.84□□□□□ -0.35
CX3CL1-201ENST00000006053 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.84□□□□□ -0.35
CX3CL1-201ENST00000006053 ZHX1Q9UKY1 873 aaPredicted RBP12.84□□□□□ -0.35
CX3CL1-201ENST00000006053 EDC4Q6P2E9 1401 aaKnown RBP12.84□□□□□ -0.35
CX3CL1-201ENST00000006053 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
CX3CL1-201ENST00000006053 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
CX3CL1-201ENST00000006053 HMMRO75330 724 aa12.83□□□□□ -0.35
CX3CL1-201ENST00000006053 EXOC6BQ9Y2D4 811 aa12.83□□□□□ -0.35
CX3CL1-201ENST00000006053 CDK12Q9NYV4 1490 aaPredicted RBP12.83□□□□□ -0.36
CX3CL1-201ENST00000006053 PDE1AP54750 535 aa12.83□□□□□ -0.36
CX3CL1-201ENST00000006053 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
CX3CL1-201ENST00000006053 TMX3Q96JJ7 454 aa12.83□□□□□ -0.36
CX3CL1-201ENST00000006053 CHL1O00533 1208 aa12.82□□□□□ -0.36
CX3CL1-201ENST00000006053 TPRNQ4KMQ1 711 aa12.82□□□□□ -0.36
CX3CL1-201ENST00000006053 G2E3Q7L622 706 aa12.82□□□□□ -0.36
CX3CL1-201ENST00000006053 LRSAM1Q6UWE0 723 aa12.82□□□□□ -0.36
CX3CL1-201ENST00000006053 RILPL2Q969X0 211 aa12.82□□□□□ -0.36
CX3CL1-201ENST00000006053 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
CX3CL1-201ENST00000006053 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
CX3CL1-201ENST00000006053 ZBTB7CA1YPR0 619 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 PTPRCP08575 1304 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 RGS12O14924 1447 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 DLG5Q8TDM6 1919 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 FAM13BQ9NYF5 915 aa12.81□□□□□ -0.36
CX3CL1-201ENST00000006053 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
CX3CL1-201ENST00000006053 PDLIM2Q96JY6 352 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms