RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 PRR36Q9H6K5 1346 aa24.24■■□□□ 1.47
HOXA11-201ENST00000006015 CYP2E1P05181 493 aaPredicted RBP24.23■■□□□ 1.47
HOXA11-201ENST00000006015 HDGFP51858 240 aaKnown RBP24.23■■□□□ 1.47
HOXA11-201ENST00000006015 TMEM2Q9UHN6 1383 aa24.23■■□□□ 1.47
HOXA11-201ENST00000006015 UQCRHLA0A096LP55 91 aa24.23■■□□□ 1.47
HOXA11-201ENST00000006015 UQCRHP07919 91 aa24.23■■□□□ 1.47
HOXA11-201ENST00000006015 BRPF1P55201 1214 aaPredicted RBP24.23■■□□□ 1.47
HOXA11-201ENST00000006015 RBSNQ9H1K0 784 aa24.23■■□□□ 1.47
HOXA11-201ENST00000006015 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.23■■□□□ 1.47
HOXA11-201ENST00000006015 ROBO2Q9HCK4 1378 aa24.22■■□□□ 1.47
HOXA11-201ENST00000006015 PRDM4Q9UKN5 801 aa24.22■■□□□ 1.47
HOXA11-201ENST00000006015 ZKSCAN5Q9Y2L8 839 aa24.22■■□□□ 1.47
HOXA11-201ENST00000006015 NCLP19338 710 aaKnown RBP24.22■■□□□ 1.47
HOXA11-201ENST00000006015 ZNF428Q96B54 188 aa24.22■■□□□ 1.47
HOXA11-201ENST00000006015 SLC26A8Q96RN1 970 aa24.21■■□□□ 1.47
HOXA11-201ENST00000006015 CPS1P31327 1500 aa24.21■■□□□ 1.47
HOXA11-201ENST00000006015 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
HOXA11-201ENST00000006015 EDC4Q6P2E9 1401 aaKnown RBP24.21■■□□□ 1.47
HOXA11-201ENST00000006015 MAP2P11137 1827 aaKnown RBP24.21■■□□□ 1.47
HOXA11-201ENST00000006015 DYNC1I1O14576 645 aa24.21■■□□□ 1.47
HOXA11-201ENST00000006015 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
HOXA11-201ENST00000006015 IL13P35225 146 aa24.2■■□□□ 1.46
HOXA11-201ENST00000006015 ZBTB7BO15156 539 aaPredicted RBP24.19■■□□□ 1.46
HOXA11-201ENST00000006015 XPCQ01831 940 aaPredicted RBP24.19■■□□□ 1.46
HOXA11-201ENST00000006015 COG3Q96JB2 828 aa24.19■■□□□ 1.46
HOXA11-201ENST00000006015 CWC22Q9HCG8 908 aaKnown RBP24.18■■□□□ 1.46
HOXA11-201ENST00000006015 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
HOXA11-201ENST00000006015 PRIM1P49642 420 aaKnown RBP24.17■■□□□ 1.46
HOXA11-201ENST00000006015 FAM135BQ49AJ0 1406 aa24.17■■□□□ 1.46
HOXA11-201ENST00000006015 CCDC39Q9UFE4 941 aa24.17■■□□□ 1.46
HOXA11-201ENST00000006015 SMAP1Q8IYB5 467 aaPredicted RBP24.15■■□□□ 1.46
HOXA11-201ENST00000006015 ADAMTS13Q76LX8 1427 aa24.15■■□□□ 1.46
HOXA11-201ENST00000006015 NFE2L2Q16236 605 aa24.15■■□□□ 1.46
HOXA11-201ENST00000006015 SASS6Q6UVJ0 657 aa24.15■■□□□ 1.46
HOXA11-201ENST00000006015 ARHGAP45Q92619 1136 aa24.15■■□□□ 1.46
HOXA11-201ENST00000006015 SIRT1Q96EB6 747 aa24.15■■□□□ 1.46
HOXA11-201ENST00000006015 TECPR2O15040 1411 aa24.14■■□□□ 1.46
HOXA11-201ENST00000006015 ELL2O00472 640 aaPredicted RBP24.14■■□□□ 1.45
HOXA11-201ENST00000006015 UBR1Q8IWV7 1749 aa24.13■■□□□ 1.45
HOXA11-201ENST00000006015 LRSAM1Q6UWE0 723 aa24.13■■□□□ 1.45
HOXA11-201ENST00000006015 C1orf115Q9H7X2 142 aa24.13■■□□□ 1.45
HOXA11-201ENST00000006015 SOX12O15370 315 aa24.12■■□□□ 1.45
HOXA11-201ENST00000006015 GSPT1P15170 499 aaKnown RBP24.12■■□□□ 1.45
HOXA11-201ENST00000006015 GPT2Q8TD30 523 aa24.12■■□□□ 1.45
HOXA11-201ENST00000006015 FAM83GA6ND36 823 aa24.12■■□□□ 1.45
HOXA11-201ENST00000006015 CDC42BPGQ6DT37 1551 aa24.11■■□□□ 1.45
HOXA11-201ENST00000006015 ACEP12821 1306 aa24.11■■□□□ 1.45
HOXA11-201ENST00000006015 PRPF40AO75400 957 aaKnown RBP24.11■■□□□ 1.45
HOXA11-201ENST00000006015 SIRT2Q8IXJ6 389 aa24.11■■□□□ 1.45
HOXA11-201ENST00000006015 TSPYL6Q8N831 410 aa24.11■■□□□ 1.45
HOXA11-201ENST00000006015 PKP1Q13835 747 aa24.1■■□□□ 1.45
HOXA11-201ENST00000006015 DCTN1Q14203 1278 aa24.1■■□□□ 1.45
HOXA11-201ENST00000006015 MRPL50Q8N5N7 158 aaKnown RBP24.09■■□□□ 1.45
HOXA11-201ENST00000006015 RBM27Q9P2N5 1060 aaKnown RBP24.09■■□□□ 1.45
HOXA11-201ENST00000006015 ABCC4O15439 1325 aa24.09■■□□□ 1.45
HOXA11-201ENST00000006015 ST18O60284 1047 aa24.09■■□□□ 1.45
HOXA11-201ENST00000006015 USP26Q9BXU7 913 aa24.09■■□□□ 1.45
HOXA11-201ENST00000006015 AATKQ6ZMQ8 1374 aa24.09■■□□□ 1.45
HOXA11-201ENST00000006015 AEBP1Q8IUX7 1158 aa24.08■■□□□ 1.45
HOXA11-201ENST00000006015 PLEKHM2Q8IWE5 1019 aa24.08■■□□□ 1.44
HOXA11-201ENST00000006015 TTC21BQ7Z4L5 1316 aa24.07■■□□□ 1.44
HOXA11-201ENST00000006015 TTC22Q5TAA0 569 aa24.07■■□□□ 1.44
HOXA11-201ENST00000006015 INTS3Q68E01 1043 aaKnown RBP24.07■■□□□ 1.44
HOXA11-201ENST00000006015 PTPRUQ92729 1446 aa24.07■■□□□ 1.44
HOXA11-201ENST00000006015 CDK12Q9NYV4 1490 aaPredicted RBP24.07■■□□□ 1.44
HOXA11-201ENST00000006015 KNDC1Q76NI1 1749 aa24.07■■□□□ 1.44
HOXA11-201ENST00000006015 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
HOXA11-201ENST00000006015 MBD3O95983 291 aa24.06■■□□□ 1.44
HOXA11-201ENST00000006015 MBIPQ9NS73 344 aa24.06■■□□□ 1.44
HOXA11-201ENST00000006015 TMEM63CQ9P1W3 806 aa24.06■■□□□ 1.44
HOXA11-201ENST00000006015 VAMP4O75379 141 aa24.05■■□□□ 1.44
HOXA11-201ENST00000006015 PLEKHG1Q9ULL1 1385 aa24.05■■□□□ 1.44
HOXA11-201ENST00000006015 SYCE3A1L190 88 aa24.05■■□□□ 1.44
HOXA11-201ENST00000006015 AMOTL2Q9Y2J4 779 aa24.05■■□□□ 1.44
HOXA11-201ENST00000006015 MON2Q7Z3U7 1717 aa24.04■■□□□ 1.44
HOXA11-201ENST00000006015 ZDHHC9Q9Y397 364 aa24.04■■□□□ 1.44
HOXA11-201ENST00000006015 EID1Q9Y6B2 187 aa24.04■■□□□ 1.44
HOXA11-201ENST00000006015 EIF4A2Q14240 407 aaKnown RBP24.03■■□□□ 1.44
HOXA11-201ENST00000006015 SULT6B1Q6IMI4 303 aa24.03■■□□□ 1.44
HOXA11-201ENST00000006015 ZGPATQ8N5A5 531 aaKnown RBP24.03■■□□□ 1.44
HOXA11-201ENST00000006015 KIAA2012Q0VF49 1180 aa24.02■■□□□ 1.44
HOXA11-201ENST00000006015 HSP90AB2PQ58FF8 381 aa24.02■■□□□ 1.44
HOXA11-201ENST00000006015 CASC1Q6TDU7 716 aa24.02■■□□□ 1.44
HOXA11-201ENST00000006015 KIF24Q5T7B8 1368 aa24.02■■□□□ 1.44
HOXA11-201ENST00000006015 C3P01024 1663 aa24.02■■□□□ 1.44
HOXA11-201ENST00000006015 GNAI1P63096 354 aa24.01■■□□□ 1.43
HOXA11-201ENST00000006015 C8orf58Q8NAV2 365 aa24.01■■□□□ 1.43
HOXA11-201ENST00000006015 CCDC94Q9BW85 323 aaPredicted RBP24.01■■□□□ 1.43
HOXA11-201ENST00000006015 IFT57Q9NWB7 429 aa24.01■■□□□ 1.43
HOXA11-201ENST00000006015 ZNF853P0CG23 659 aa24■■□□□ 1.43
HOXA11-201ENST00000006015 DCTPP1Q9H773 170 aa24■■□□□ 1.43
HOXA11-201ENST00000006015 AKAP12Q02952 1782 aa24■■□□□ 1.43
HOXA11-201ENST00000006015 PLEKHG3A1L390 1219 aa24■■□□□ 1.43
HOXA11-201ENST00000006015 ITSN1Q15811 1721 aa23.99■■□□□ 1.43
HOXA11-201ENST00000006015 API5Q9BZZ5 524 aaKnown RBP23.99■■□□□ 1.43
HOXA11-201ENST00000006015 PTMAP06454 111 aaKnown RBP23.98■■□□□ 1.43
HOXA11-201ENST00000006015 MYRIPQ8NFW9 859 aa23.98■■□□□ 1.43
HOXA11-201ENST00000006015 TWISTNBQ3B726 338 aaPredicted RBP23.97■■□□□ 1.43
HOXA11-201ENST00000006015 TSPY26PQ9H489 355 aa23.97■■□□□ 1.43
HOXA11-201ENST00000006015 REC8O95072 547 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms