RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 PKD1L3Q7Z443 1732 aa24.92■■□□□ 1.58
IFRD1-201ENST00000005558 NRAPQ86VF7 1730 aa24.92■■□□□ 1.58
IFRD1-201ENST00000005558 MYH16Q9H6N6 1097 aa24.92■■□□□ 1.58
IFRD1-201ENST00000005558 MAP3K5Q99683 1374 aa24.92■■□□□ 1.58
IFRD1-201ENST00000005558 HTATSF1O43719 755 aaKnown RBP24.91■■□□□ 1.58
IFRD1-201ENST00000005558 IFT57Q9NWB7 429 aa24.91■■□□□ 1.58
IFRD1-201ENST00000005558 GNAT3A8MTJ3 354 aa24.91■■□□□ 1.58
IFRD1-201ENST00000005558 JCADQ9P266 1359 aa24.9■■□□□ 1.58
IFRD1-201ENST00000005558 CARD10Q9BWT7 1032 aa24.9■■□□□ 1.58
IFRD1-201ENST00000005558 ADAMTS7Q9UKP4 1686 aa24.9■■□□□ 1.58
IFRD1-201ENST00000005558 ADAMTS2O95450 1211 aa24.89■■□□□ 1.58
IFRD1-201ENST00000005558 PLEKHO1Q53GL0 409 aaPredicted RBP24.89■■□□□ 1.58
IFRD1-201ENST00000005558 CFAP44Q96MT7 982 aa24.89■■□□□ 1.58
IFRD1-201ENST00000005558 STRN4Q9NRL3 753 aa24.89■■□□□ 1.58
IFRD1-201ENST00000005558 MBIPQ9NS73 344 aa24.89■■□□□ 1.58
IFRD1-201ENST00000005558 HSPA1LP34931 641 aa24.89■■□□□ 1.57
IFRD1-201ENST00000005558 EXOSC9Q06265 439 aaKnown RBP24.89■■□□□ 1.57
IFRD1-201ENST00000005558 AMOTQ4VCS5 1084 aa24.89■■□□□ 1.57
IFRD1-201ENST00000005558 TOM1L2Q6ZVM7 507 aa24.89■■□□□ 1.57
IFRD1-201ENST00000005558 CEMIPQ8WUJ3 1361 aa24.88■■□□□ 1.57
IFRD1-201ENST00000005558 NUTM2BA6NNL0 878 aaPredicted RBP24.88■■□□□ 1.57
IFRD1-201ENST00000005558 NUTM2EB1AL46 878 aaPredicted RBP24.88■■□□□ 1.57
IFRD1-201ENST00000005558 CHL1O00533 1208 aa24.88■■□□□ 1.57
IFRD1-201ENST00000005558 NUTM2AQ8IVF1 878 aaPredicted RBP24.88■■□□□ 1.57
IFRD1-201ENST00000005558 LGR6Q9HBX8 967 aa24.87■■□□□ 1.57
IFRD1-201ENST00000005558 SHANK3Q9BYB0 1731 aa24.87■■□□□ 1.57
IFRD1-201ENST00000005558 OVOS2A0A0G2JMS6 1433 aa24.87■■□□□ 1.57
IFRD1-201ENST00000005558 GNAI1P63096 354 aa24.86■■□□□ 1.57
IFRD1-201ENST00000005558 IRX6P78412 446 aaPredicted RBP24.86■■□□□ 1.57
IFRD1-201ENST00000005558 CALD1Q05682 793 aaKnown RBP24.86■■□□□ 1.57
IFRD1-201ENST00000005558 ZNF530Q6P9A1 599 aaPredicted RBP24.86■■□□□ 1.57
IFRD1-201ENST00000005558 PLEKHG2Q9H7P9 1386 aa24.86■■□□□ 1.57
IFRD1-201ENST00000005558 LRP6O75581 1613 aa24.86■■□□□ 1.57
IFRD1-201ENST00000005558 RAPGEF4Q8WZA2 1011 aa24.86■■□□□ 1.57
IFRD1-201ENST00000005558 LAS1LQ9Y4W2 734 aaKnown RBP24.86■■□□□ 1.57
IFRD1-201ENST00000005558 SLIT2O94813 1529 aa24.85■■□□□ 1.57
IFRD1-201ENST00000005558 PARP4Q9UKK3 1724 aaKnown RBP24.85■■□□□ 1.57
IFRD1-201ENST00000005558 EVA1CP58658 441 aa24.85■■□□□ 1.57
IFRD1-201ENST00000005558 FKBP8Q14318 412 aa24.85■■□□□ 1.57
IFRD1-201ENST00000005558 AKAP4Q5JQC9 854 aa24.85■■□□□ 1.57
IFRD1-201ENST00000005558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.85■■□□□ 1.577e-7■■□□□ 12.6
IFRD1-201ENST00000005558 TATP17735 454 aaPredicted RBP24.84■■□□□ 1.57
IFRD1-201ENST00000005558 RRP1P56182 461 aaKnown RBP24.84■■□□□ 1.57
IFRD1-201ENST00000005558 NWD2Q9ULI1 1742 aa24.83■■□□□ 1.57
IFRD1-201ENST00000005558 BCAR3O75815 825 aa24.83■■□□□ 1.57
IFRD1-201ENST00000005558 RTF1Q92541 710 aaKnown RBP24.83■■□□□ 1.57
IFRD1-201ENST00000005558 MIS18AQ9NYP9 233 aa24.82■■□□□ 1.56
IFRD1-201ENST00000005558 SIPA1L3O60292 1781 aaPredicted RBP24.82■■□□□ 1.56
IFRD1-201ENST00000005558 CYP27B1O15528 508 aa24.82■■□□□ 1.56
IFRD1-201ENST00000005558 RARSP54136 660 aaKnown RBP24.82■■□□□ 1.56
IFRD1-201ENST00000005558 TSPYL6Q8N831 410 aa24.82■■□□□ 1.56
IFRD1-201ENST00000005558 SCN11AQ9UI33 1791 aa24.81■■□□□ 1.56
IFRD1-201ENST00000005558 DISP2A7MBM2 1401 aa24.81■■□□□ 1.56
IFRD1-201ENST00000005558 PLIN1O60240 522 aa24.81■■□□□ 1.56
IFRD1-201ENST00000005558 MPRIPQ6WCQ1 1025 aa24.81■■□□□ 1.56
IFRD1-201ENST00000005558 KDM6AO15550 1401 aaPredicted RBP24.8■■□□□ 1.56
IFRD1-201ENST00000005558 C8orf58Q8NAV2 365 aa24.8■■□□□ 1.56
IFRD1-201ENST00000005558 PHKG2P15735 406 aa24.79■■□□□ 1.56
IFRD1-201ENST00000005558 WNK3Q9BYP7 1800 aa24.79■■□□□ 1.56
IFRD1-201ENST00000005558 RNMTO43148 476 aaKnown RBP24.79■■□□□ 1.56
IFRD1-201ENST00000005558 KRT24Q2M2I5 525 aa24.78■■□□□ 1.56
IFRD1-201ENST00000005558 VAMP4O75379 141 aa24.77■■□□□ 1.56
IFRD1-201ENST00000005558 IL2RBP14784 551 aa24.77■■□□□ 1.56
IFRD1-201ENST00000005558 SPG7Q9UQ90 795 aa24.77■■□□□ 1.56
IFRD1-201ENST00000005558 SPATA31A6Q5VVP1 1343 aa24.77■■□□□ 1.56
IFRD1-201ENST00000005558 CT47B1P0C2W7 299 aaPredicted RBP24.77■■□□□ 1.56
IFRD1-201ENST00000005558 BCL9LQ86UU0 1499 aa24.77■■□□□ 1.56
IFRD1-201ENST00000005558 KDM3BQ7LBC6 1761 aa24.77■■□□□ 1.56
IFRD1-201ENST00000005558 USP35Q9P2H5 1018 aa24.76■■□□□ 1.55
IFRD1-201ENST00000005558 C1orf141Q5JVX7 400 aa24.75■■□□□ 1.55
IFRD1-201ENST00000005558 TAF7Q15545 349 aaPredicted RBP24.75■■□□□ 1.55
IFRD1-201ENST00000005558 C20orf194Q5TEA3 1177 aa24.74■■□□□ 1.55
IFRD1-201ENST00000005558 SPATA31A1Q5TZJ5 1347 aa24.73■■□□□ 1.55
IFRD1-201ENST00000005558 IFNL2Q8IZJ0 200 aa24.73■■□□□ 1.55
IFRD1-201ENST00000005558 ZCRB1Q8TBF4 217 aaKnown RBP24.73■■□□□ 1.55
IFRD1-201ENST00000005558 SSH1Q8WYL5 1049 aa24.73■■□□□ 1.55
IFRD1-201ENST00000005558 NEFLP07196 543 aa24.72■■□□□ 1.55
IFRD1-201ENST00000005558 ELL2O00472 640 aaPredicted RBP24.72■■□□□ 1.55
IFRD1-201ENST00000005558 FNBP4Q8N3X1 1017 aaPredicted RBP24.72■■□□□ 1.55
IFRD1-201ENST00000005558 BCL2L13Q9BXK5 485 aa24.72■■□□□ 1.55
IFRD1-201ENST00000005558 BABAM1Q9NWV8 329 aa24.72■■□□□ 1.55
IFRD1-201ENST00000005558 TSPYL4Q9UJ04 414 aa24.72■■□□□ 1.55
IFRD1-201ENST00000005558 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
IFRD1-201ENST00000005558 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
IFRD1-201ENST00000005558 MRC1P22897 1456 aa24.71■■□□□ 1.55
IFRD1-201ENST00000005558 KCNQ3O43525 872 aa24.7■■□□□ 1.54
IFRD1-201ENST00000005558 TWISTNBQ3B726 338 aaPredicted RBP24.7■■□□□ 1.54
IFRD1-201ENST00000005558 C8orf37Q96NL8 207 aa24.7■■□□□ 1.54
IFRD1-201ENST00000005558 NKX1-1Q15270 411 aaPredicted RBP24.69■■□□□ 1.54
IFRD1-201ENST00000005558 UNC5CLQ8IV45 518 aa24.68■■□□□ 1.54
IFRD1-201ENST00000005558 TOGARAM1Q9Y4F4 1720 aa24.68■■□□□ 1.54
IFRD1-201ENST00000005558 TNNQ9UQP3 1299 aa24.68■■□□□ 1.54
IFRD1-201ENST00000005558 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.67■■□□□ 1.54
IFRD1-201ENST00000005558 PCDH11XQ9BZA7 1347 aa24.67■■□□□ 1.54
IFRD1-201ENST00000005558 PCDH11YQ9BZA8 1340 aa24.67■■□□□ 1.54
IFRD1-201ENST00000005558 NGLY1Q96IV0 654 aa24.67■■□□□ 1.54
IFRD1-201ENST00000005558 DCAF5Q96JK2 942 aa24.66■■□□□ 1.54
IFRD1-201ENST00000005558 BRPF1P55201 1214 aaPredicted RBP24.65■■□□□ 1.54
IFRD1-201ENST00000005558 ALDH1L2Q3SY69 923 aa24.65■■□□□ 1.54
IFRD1-201ENST00000005558 SLC52A2Q9HAB3 445 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms