RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Fan1Q69ZT1 1020 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Polr3gQ6NXY9 223 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Plekhm2Q80TQ5 1018 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ube2q2Q8K2Z8 378 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Sf3a1Q8K4Z5 791 aaKnown RBP9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Aldh1l1Q8R0Y6 902 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Kansl3A2RSY1 903 aaKnown RBP9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cspp1B2RX88 1205 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ankrd44B2RXR6 993 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ess2O70279 479 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ano6Q6P9J9 911 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Igsf3Q6ZQA6 1194 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ifi35Q9D8C4 286 aa9.14□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Pola1P33609 1465 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Triml2E9PW10 424 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Kif2aP28740 705 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Mtx1P47802 317 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Tshz1Q5DTH5 1084 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 TfrcQ62351 763 aaKnown RBP9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Mum1Q6DID5 682 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 U2surpQ6NV83 1029 aaKnown RBP9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Mrps27Q8BK72 415 aaKnown RBP9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Tulp4Q9JIL5 1547 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Tpm3P21107 285 aaKnown RBP9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Zscan22Q8BGS5 496 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Tshz3Q8CGV9 1081 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ccar2Q8VDP4 922 aaKnown RBP9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ankrd50F7BE84 1390 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Kiaa1551Q5DTW7 1521 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Fam177a1Q8BR63 207 aa9.13□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ccdc171E9Q1U1 1324 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Zkscan7E9PVW1 718 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Erc2Q6PH08 957 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Nop14Q8R3N1 860 aaKnown RBP9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Scaf11E9PZM7 1456 aaKnown RBP9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Rtf1A2AQ19 715 aaKnown RBP9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Usp25P57080 1055 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 EvcP57680 1005 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Kmt5bQ3U8K7 883 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Rab3gap1Q80UJ7 981 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Rbm33Q9CXK9 1231 aaKnown RBP9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Nsd3Q6P2L6 1439 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ttc21aQ8C0S4 1314 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cep170Q6A065 1588 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Fmnl2A2APV2 1086 aa9.12□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Gprasp1Q5U4C1 1347 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Morc2aQ69ZX6 1030 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cep135Q6P5D4 1140 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ccz1Q8C1Y8 480 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Magi3Q9EQJ9 1476 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 MycnP03966 462 aaKnown RBP9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Otud6bQ8K2H2 294 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Srpk2O54781 681 aaKnown RBP9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Kiaa1211Q5PR69 1207 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Aldh8a1Q8BH00 487 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Gcc1Q9D4H2 778 aa9.11□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Arglu1Q3UL36 271 aaKnown RBP9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Slc20a2Q80UP8 656 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ccdc178Q8CDV0 866 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Med4Q9CQA5 270 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Prex2Q3LAC4 1598 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 AI481877A2ALV5 1481 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Atp6v1dP57746 247 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ube2hP62257 183 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Frat1P70339 274 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Prune1Q8BIW1 454 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Spata32Q8C5V0 334 aa9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Rai14Q9EP71 979 aaKnown RBP9.1□□□□□ -0.95
Bdnf-209ENSMUST00000111050 AknaQ80VW7 1404 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Erich4Q3UNU4 136 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 HnrnpuQ8VEK3 800 aaKnown RBP9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Edc4Q3UJB9 1406 aaKnown RBP9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Fmn2Q9JL04 1578 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cdk4P30285 303 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Nfe2l3Q9WTM4 660 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Myom1Q62234 1667 aaKnown RBP9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cavin4A2AMM0 362 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Trap1aP19473 224 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Anp32eP97822 260 aaKnown RBP9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Cfap157Q0VFX2 523 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Ccdc162pQ0VG85 912 aa9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 LlphQ9D945 130 aaKnown RBP9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Add3Q9QYB5 706 aaKnown RBP9.09□□□□□ -0.95
Bdnf-209ENSMUST00000111050 Adamts12Q811B3 1600 aa9.09□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Arid5bQ8BM75 1188 aaKnown RBP9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Wdr24Q8CFJ9 790 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Hsp90b1P08113 802 aaKnown RBP9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Pde4cQ3UEI1 686 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Pmfbp1Q9WVQ0 1022 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Mlh3A0A1Y7VMP7 1443 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Magi1Q6RHR9 1471 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Itsn2Q9Z0R6 1659 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Wdr93Q402B2 695 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 DpydQ8CHR6 1025 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 AnlnQ8K298 1121 aaKnown RBP9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Iqca1Q9CUL5 857 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Vps33aQ9D2N9 598 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Irx5Q9JKQ4 484 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Bcar3Q9QZK2 820 aa9.08□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Mcm2P97310 904 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms