RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Rassf4Q8CB96 322 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Tubgcp6G5E8P0 1769 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Fancd2Q80V62 1450 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ppip5k1A2ARP1 1436 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Zscan29E9Q5B4 869 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Paxbp1P58501 919 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Nucb1Q02819 459 aaKnown RBP6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Oxsr1Q6P9R2 527 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Snx13Q6PHS6 957 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 MlecQ6ZQI3 291 aaKnown RBP6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ulbp1Q8HWA3 334 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Tdrd9Q14BI7 1383 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ccdc171E9Q1U1 1324 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Hsp90b1P08113 802 aaKnown RBP6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Pdia3P27773 505 aaKnown RBP6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Erc2Q6PH08 957 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Kcnf1Q7TSH7 493 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ppp6r3Q922D4 844 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Gcc1Q9D4H2 778 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Hmgn5Q9JL35 406 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Syt10Q9R0N4 523 aa6.81□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Kiaa1551Q5DTW7 1521 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Rtf1A2AQ19 715 aaKnown RBP6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Mcm2P97310 904 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Cfap157Q0VFX2 523 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Spag5Q7TME2 1165 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Phf20l1Q8CCJ9 1013 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Rbm33Q9CXK9 1231 aaKnown RBP6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Mapkbp1Q6NS57 1503 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Elp1Q7TT37 1333 aaKnown RBP6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Chd1P40201 1711 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 CgnP59242 1191 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Babam1Q3UI43 333 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Zpr1Q62384 459 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Slc20a2Q80UP8 656 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Naa30Q8CES0 364 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 AnlnQ8K298 1121 aaKnown RBP6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Cd109Q8R422 1442 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Rai14Q9EP71 979 aaKnown RBP6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Cwc15Q9JHS9 229 aaKnown RBP6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 PdcQ9QW08 244 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Prr29B1ARI9 187 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Pcdh10E9PXQ7 1057 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Srpk2O54781 681 aaKnown RBP6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ube2hP62257 183 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Bach1P97302 739 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ccdc162pQ0VG85 912 aa6.8□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Kdm6bQ5NCY0 1641 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Lcmt1A0A0U1RNF2 332 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Usp25P57080 1055 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Nol11Q8BJW5 723 aaKnown RBP6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Mrps27Q8BK72 415 aaKnown RBP6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 KinQ8K339 391 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Spag9Q58A65 1321 aaKnown RBP6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ms4a1P19437 291 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ccdc178Q8CDV0 866 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Aldh1l1Q8R0Y6 902 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Tmx1Q8VBT0 278 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Pcdhgc5Q91XW9 944 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ifi35Q9D8C4 286 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Kiaa1210E9Q0C6 1637 aa6.79□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Zkscan16A2ALW2 728 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Triml2E9PW10 424 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Q3UPC7 1272 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Trim27Q62158 513 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Rab3gap1Q80UJ7 981 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Nlrp3Q8R4B8 1033 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Zbtb22Q9Z0G7 638 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 AI481877A2ALV5 1481 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Iqgap1Q9JKF1 1657 aaKnown RBP6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Mtx1P47802 317 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Lrriq3Q14DL3 633 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ano6Q6P9J9 911 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 EvcP57680 1005 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Rtel1Q0VGM9 1203 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ctr9Q62018 1173 aaKnown RBP6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Usp40Q8BWR4 1235 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Ccar2Q8VDP4 922 aaKnown RBP6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 FanclQ9CR14 375 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Golga5Q9QYE6 729 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Mroh2aD3Z750 1679 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Gprasp1Q5U4C1 1347 aa6.78□□□□□ -1.32
Rc3h1-201ENSMUST00000035911 Dot1lQ6XZL8 1540 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Vwa3bJ9JI28 736 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Mns1Q61884 491 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Igsf3Q6ZQA6 1194 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Plekhm2Q80TQ5 1018 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Aldh8a1Q8BH00 487 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Pmfbp1Q9WVQ0 1022 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Mlh3A0A1Y7VMP7 1443 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Brpf3B2KF05 1204 aaKnown RBP6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Ankrd44B2RXR6 993 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Frat1P70339 274 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Gm156Q58A37 223 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Nrbp1Q99J45 535 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 LlphQ9D945 130 aaKnown RBP6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Mad1l1Q9WTX8 717 aaKnown RBP6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Trim55G3X8Y1 545 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Sparcl1P70663 650 aa6.77□□□□□ -1.33
Rc3h1-201ENSMUST00000035911 Kmt5bQ3U8K7 883 aa6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms