RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Cwc27Q3TKY6 469 aa6.49□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Tnpo1Q8BFY9 898 aaKnown RBP6.49□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Nol11Q8BJW5 723 aaKnown RBP6.49□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Rprd2Q6NXI6 1469 aaKnown RBP6.49□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Gm7361D3Z6R1 267 aa6.49□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Ampd3O08739 766 aa6.49□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Sel1lQ9Z2G6 790 aa6.49□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Elp1Q7TT37 1333 aaKnown RBP6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Pde4bB1AWC9 736 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Cnnm3Q32NY4 713 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Lrrfip2Q91WK0 415 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Morc2aQ69ZX6 1030 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Fkbp5Q64378 456 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 BcanQ61361 883 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Fmnl3Q6ZPF4 1028 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Fam135aQ6NS59 1506 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 TbcaP48428 108 aaKnown RBP6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Map3k5O35099 1380 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Cep55Q8BT07 462 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 NexmifQ5DTT1 1515 aa6.48□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Trap1aP19473 224 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Nectin2P32507 530 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 AidaQ8C4Q6 305 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Rbm5Q91YE7 815 aaKnown RBP6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Cabp2Q9JLK4 216 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Ddx46Q569Z5 1032 aaKnown RBP6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Tmem87bQ8BKU8 555 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Ncoa1P70365 1447 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Tubb5P99024 444 aaKnown RBP6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Smc5Q8CG46 1101 aaKnown RBP6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Tmem266Q8BZB3 538 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Pik3c2gO70167 1506 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Ptpdc1Q6NZK8 747 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Gtf2a1Q99PM3 378 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 PrxO55103 1391 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Gtf2f1Q3THK3 508 aaKnown RBP6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Ccdc150Q8CDI7 1110 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Ttc5Q99LG4 440 aa6.47□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Pafah1b1P63005 410 aaKnown RBP6.46□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Cep89Q9CZX2 791 aa6.46□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Ankle2Q6P1H6 964 aa6.46□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Cfap53Q9D439 514 aa6.46□□□□□ -1.37
Vps13d-201ENSMUST00000020441 NefhP19246 1090 aa6.46□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Pik3r4Q8VD65 1358 aa6.46□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Plb1Q3TTY0 1478 aa6.46□□□□□ -1.37
Vps13d-201ENSMUST00000020441 Afap1Q80YS6 731 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Vps36Q91XD6 386 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Rapgef3Q8VCC8 918 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Stk3Q9JI10 497 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Fkbp4P30416 458 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Abcd1P48410 736 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Larp1Q6ZQ58 1072 aaKnown RBP6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Erlin1Q91X78 346 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Phlpp2Q8BXA7 1320 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Jakmip1Q8BVL9 626 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Gm21663A0A0G2JE01 267 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 5031410I06RikE9Q4E0 267 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Gm1979E9QAN3 267 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Gm5862K7N5V5 267 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Gm10220K7N660 267 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 MpripP97434 1024 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Prpf4bQ61136 1007 aaKnown RBP6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Nup88Q8CEC0 753 aaKnown RBP6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Mical1Q8VDP3 1048 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Ccdc191J3QQ27 883 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Q3UJC8 639 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Slu7Q8BHJ9 585 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Stac3Q8BZ71 360 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Dhx9O70133 1380 aaKnown RBP6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Gnat3Q3V3I2 354 aa6.46□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Tsg101Q61187 391 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Fsd1Q7TPM6 496 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 PalmQ9Z0P4 383 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Krt23Q99PS0 422 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Eif5P59325 429 aaKnown RBP6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Ccdc83Q9D4V3 305 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Ppm1fQ8CGA0 452 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Api5O35841 504 aaKnown RBP6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Plekhm2Q80TQ5 1018 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Cetn1P41209 172 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 HnrnpmQ9D0E1 729 aaKnown RBP6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Gapvd1Q6PAR5 1458 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 InsrP15208 1372 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Slc13a4Q8BZ82 625 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Gm44503E9PYU5 387 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Arglu1Q3UL36 271 aaKnown RBP6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Naa15Q80UM3 865 aaKnown RBP6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Q7TT23 1179 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Fancd2Q80V62 1450 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Irgm2A0A140LIF8 407 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 DesP31001 469 aaKnown RBP6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Fam13aQ8BGI4 693 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Cfap69Q8BH53 942 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Cog6Q8R3I3 657 aa6.45□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Limch1Q3UH68 1057 aa6.44□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Vps37dQ810I0 261 aa6.44□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Speer4bQ9D9F7 267 aa6.44□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Igbp1bQ9QZ29 343 aa6.44□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Clul1Q3ZRW6 464 aa6.44□□□□□ -1.38
Vps13d-201ENSMUST00000020441 Cdan1Q8CC12 1239 aa6.44□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms