RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CCR10P46092 362 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 ATP5OP48047 213 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 EIF3EP60228 445 aaKnown RBP9.96□□□□□ -0.82
PHGDH-222ENST00000641587 CTBSQ01459 385 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 GBE1Q04446 702 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 BCL2L1Q07817 233 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 ILF3Q12906 894 aaKnown RBP eCLIP9.96□□□□□ -0.82
PHGDH-222ENST00000641587 KLF1Q13351 362 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-222ENST00000641587 BIRC2Q13490 618 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 NCBP2-AS2Q69YL0 99 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 SLC9A4Q6AI14 798 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 DOK6Q6PKX4 331 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 CLEC18BQ6UXF7 455 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 RFLNAQ6ZTI6 216 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 ARHGAP12Q8IWW6 846 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 NRSN1Q8IZ57 195 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 NPWQ8N729 165 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 PLD5Q8N7P1 536 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 CLEC18CQ8NCF0 446 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 AGBL5Q8NDL9 886 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 SPATA4Q8NEY3 305 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 ACTL9Q8TC94 416 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 MAGOHBQ96A72 148 aaKnown RBP9.96□□□□□ -0.82
PHGDH-222ENST00000641587 CTRCQ99895 268 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 CINPQ9BW66 212 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-222ENST00000641587 GSDMCQ9BYG8 508 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 B3GNT4Q9C0J1 378 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 ZMYND15Q9H091 742 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 HOMER3Q9NSC5 361 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 SLC39A1Q9NY26 324 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 GOLGA6AQ9NYA3 693 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 DONSONQ9NYP3 566 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 SAE1Q9UBE0 346 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-222ENST00000641587 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
PHGDH-222ENST00000641587 TRBV23OR9-2A0A075B6M9 112 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 LOC101059948A0A1B0GTJ6 334 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ZNF891A8MT65 544 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 A8MU76 341 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 DFFAO00273 331 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 GP1BBP13224 206 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 LHCGRP22888 699 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 OAS2P29728 719 aaKnown RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 CSTF2P33240 577 aaKnown RBP eCLIP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ADCY8P40145 1251 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ETV3P41162 512 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ACTR1BP42025 376 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 CSNK1DP48730 415 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 SCNN1BP51168 640 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 NDST2P52849 883 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ACTR1AP61163 376 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 CDK3Q00526 305 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 SIX1Q15475 284 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 SNAP47Q5SQN1 464 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 TEX35Q5T0J7 233 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 CCDC70Q6NSX1 233 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 DARS2Q6PI48 645 aaKnown RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 TIPARPQ7Z3E1 657 aaKnown RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ZNF572Q7Z3I7 529 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 HSD11B1LQ7Z5J1 315 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 TSPAN33Q86UF1 283 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 TRIM74Q86UV6 250 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ZC3H18Q86VM9 953 aaKnown RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 BMPERQ8N8U9 685 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 PRELID2Q8N945 189 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 OR4D9Q8NGE8 314 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 C9orf43Q8TAL5 461 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 PDCD6IPQ8WUM4 868 aaKnown RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 DTD2Q96FN9 168 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 SMIM14Q96QK8 99 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 KRT12Q99456 494 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 DDA1Q9BW61 102 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 TEX101Q9BY14 249 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 DDX47Q9H0S4 455 aaKnown RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 CDH19Q9H159 772 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 SP110Q9HB58 689 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 APMAPQ9HDC9 416 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 PHPT1Q9NRX4 125 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 KCNK4Q9NYG8 393 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 PILRAQ9UKJ1 303 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 MAN2B2Q9Y2E5 1009 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 PCDHGC4Q9Y5F7 938 aa9.95□□□□□ -0.82
PHGDH-222ENST00000641587 PCYT1BQ9Y5K3 369 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 MRPS18BQ9Y676 258 aaKnown RBP9.95□□□□□ -0.82
PHGDH-222ENST00000641587 ICE1Q9Y2F5 2266 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 BLACEA4D250 179 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 ARHGAP42A6NI28 874 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 K7EM74 188 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 PPP1R12AO14974 1030 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 LIASO43766 372 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 HEXIM1O94992 359 aaKnown RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 EML2O95834 649 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 VIPR1P32241 457 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 GPR3P46089 330 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 NR2C2P49116 596 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 PPM1FP49593 454 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 SLC10A7Q0GE19 358 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 CDC20Q12834 499 aa9.94□□□□□ -0.82
PHGDH-222ENST00000641587 TRA2AQ13595 282 aaKnown RBP eCLIP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 PAFAH1B3Q15102 231 aaKnown RBP9.94□□□□□ -0.82
PHGDH-222ENST00000641587 PDK1Q15118 436 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms