RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ACP5P13686 325 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 F3P13726 295 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 GPLD1P80108 840 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 PDE1BQ01064 536 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 KIR2DS5Q14953 304 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 TAF1AQ15573 450 aaPredicted RBP17.49■□□□□ 0.39
PTPN11-207ENST00000639857 P3H1Q32P28 736 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 MAP9Q49MG5 647 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 B3GNT8Q7Z7M8 397 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 CLEC14AQ86T13 490 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 PIM3Q86V86 326 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 LRRTM4Q86VH4 590 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 SLITRK4Q8IW52 837 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 SLC35B2Q8TB61 432 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 SLC37A2Q8TED4 501 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 PATE1Q8WXA2 126 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 SH3KBP1Q96B97 665 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 CCDC97Q96F63 343 aaPredicted RBP17.49■□□□□ 0.39
PTPN11-207ENST00000639857 DCBLD2Q96PD2 775 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 FICDQ9BVA6 458 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 ARNT2Q9HBZ2 717 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 EPB41L5Q9HCM4 733 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 BPIFA1Q9NP55 256 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 SARS2Q9NP81 518 aaKnown RBP17.49■□□□□ 0.39
PTPN11-207ENST00000639857 IL26Q9NPH9 171 aa17.49■□□□□ 0.39
PTPN11-207ENST00000639857 GLYATL1P3A0A0U1RQE8 302 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 C2orf81A6NN90 581 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 F5H423 210 aaPredicted RBP17.48■□□□□ 0.39
PTPN11-207ENST00000639857 B4GAT1O43505 415 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 NRDCO43847 1150 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 KCNJ13O60928 360 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 AGTP01019 485 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 CCDC175P0C221 793 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 GTF2H3Q13889 308 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 PARP6Q2NL67 630 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 ATP13A5Q4VNC0 1218 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 LDLRAP1Q5SW96 308 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.48■□□□□ 0.39
PTPN11-207ENST00000639857 SEL1L2Q5TEA6 688 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 IYDQ6PHW0 289 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 ARHGEF18Q6ZSZ5 1173 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 RAB11FIP2Q7L804 512 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 DDHD1Q8NEL9 900 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 CCDC110Q8TBZ0 833 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 ALS2CR12Q96Q35 445 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 FAM118BQ9BPY3 351 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 TBC1D29Q9UFV1 150 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 GUCA1BQ9UMX6 200 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 KCNK6Q9Y257 313 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 PRKAB1Q9Y478 270 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 PCDHGA7Q9Y5G6 932 aa17.48■□□□□ 0.39
PTPN11-207ENST00000639857 BPTFQ12830 3046 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 HGSO14964 777 aaPredicted RBP17.47■□□□□ 0.39
PTPN11-207ENST00000639857 PPM1DO15297 605 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 STX7O15400 261 aaKnown RBP17.47■□□□□ 0.39
PTPN11-207ENST00000639857 CDK14O94921 469 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 CRTAMO95727 393 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 LPOP22079 712 aaPredicted RBP17.47■□□□□ 0.39
PTPN11-207ENST00000639857 CD1CP29017 333 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 ALDH4A1P30038 563 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 EPHA4P54764 986 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 OR1D5P58170 312 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 HHEXQ03014 270 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 TRA2AQ13595 282 aaKnown RBP eCLIP17.47■□□□□ 0.39
PTPN11-207ENST00000639857 COL28A1Q2UY09 1125 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 SLC9B2Q86UD5 537 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 LRRC8AQ8IWT6 810 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 FBXO39Q8N4B4 442 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 HNRNPLLQ8WVV9 542 aaKnown RBP17.47■□□□□ 0.39
PTPN11-207ENST00000639857 RTP4Q96DX8 246 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 CMKLR1Q99788 373 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 TBL1YQ9BQ87 522 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 DPH1Q9BZG8 443 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 FOXP3Q9BZS1 431 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 B3GNT4Q9C0J1 378 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 EPB41L1Q9H4G0 881 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 AKAP7Q9P0M2 348 aaPredicted RBP17.47■□□□□ 0.39
PTPN11-207ENST00000639857 TMPRSS11EQ9UL52 423 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 ATXN7L1Q9ULK2 861 aaPredicted RBP17.47■□□□□ 0.39
PTPN11-207ENST00000639857 PTPRQQ9UMZ3 2332 aa17.47■□□□□ 0.39
PTPN11-207ENST00000639857 ZFHX4Q86UP3 3567 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 IGHV1OR21-1A0A087WYE8 117 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 PRR19A6NJB7 356 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 PSMD3O43242 534 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 TNFSF15O95150 251 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 ZNF7P17097 686 aaPredicted RBP17.46■□□□□ 0.39
PTPN11-207ENST00000639857 VCLP18206 1134 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 STIP1P31948 543 aaKnown RBP17.46■□□□□ 0.39
PTPN11-207ENST00000639857 TMEM115Q12893 351 aaPredicted RBP17.46■□□□□ 0.39
PTPN11-207ENST00000639857 CHRNA6Q15825 494 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 INSCQ1MX18 579 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 KCTD11Q693B1 232 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 CRTC3Q6UUV7 619 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 FAM151BQ6UXP7 276 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 WASH2PQ6VEQ5 465 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 ZNF547Q8IVP9 402 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 FAM71DQ8N9W8 422 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 OR4D9Q8NGE8 314 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 OR10G6Q8NH81 332 aa17.46■□□□□ 0.39
PTPN11-207ENST00000639857 TTC25Q96NG3 672 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms