RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 SPTLC3Q9NUV7 552 aa3.42□□□□□ -1.86
CCDC7-213ENST00000639290 TRNAU1APQ9NX07 287 aaKnown RBP3.42□□□□□ -1.86
CCDC7-213ENST00000639290 KCNS2Q9ULS6 477 aa3.42□□□□□ -1.86
CCDC7-213ENST00000639290 MRPS2Q9Y399 296 aaKnown RBP3.42□□□□□ -1.86
CCDC7-213ENST00000639290 VWFP04275 2813 aa3.42□□□□□ -1.86
CCDC7-213ENST00000639290 CXorf51AA0A1B0GTR3 108 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 C9J4A7 227 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PIK3R2O00459 728 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PPM1DO15297 605 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 LMX1BO60663 402 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 FBXO21O94952 628 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PRAMEF1O95521 474 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 FGF1P05230 155 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SLC2A4P14672 509 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 EPB42P16452 691 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SDSP20132 328 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 HALP42357 657 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 GZMKP49863 264 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ASCL1P50553 236 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SLC5A3P53794 718 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 DSCR9P59020 149 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 MTM1Q13496 603 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 KRT72Q14CN4 511 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 NCF4Q15080 339 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 TMEM214Q6NUQ4 689 aaKnown RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PPP1R32Q7Z5V6 425 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CCDC89Q8N998 374 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CCDC148Q8NFR7 591 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 MR1Q95460 341 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PCED1BQ96HM7 432 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 EXOC2Q96KP1 924 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 TCF12Q99081 682 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 HSD17B14Q9BPX1 270 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SELENOOQ9BVL4 669 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 DPEP2Q9H4A9 486 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ARL15Q9NXU5 204 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 DPP3Q9NY33 737 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 TMEM9Q9P0T7 183 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 GDF2Q9UK05 429 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ALG6Q9Y672 507 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 DUSP10Q9Y6W6 482 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 RAI1Q7Z5J4 1906 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SVEP1Q4LDE5 3571 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 VWA3AA6NCI4 1184 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PDE2AO00408 941 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 MSTNO14793 375 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 OGTO15294 1046 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CLDN3O15551 220 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SUSD5O60279 629 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 USO1O60763 962 aaKnown RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SLITRK3O94933 977 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 IL18RAPO95256 599 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PLEKHA8P1O95397 391 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PAK4O96013 591 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CYP1A1P04798 512 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 HBQ1P09105 142 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CCNB1P14635 433 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ZNF18P17022 549 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CD70P32970 193 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ZFP36L2P47974 494 aaKnown RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 RCAN1P53805 252 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ADCY2Q08462 1091 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 EIF4EBP2Q13542 120 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 GBX1Q14549 363 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ADGRF1Q5T601 910 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 FOXB2Q5VYV0 432 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 VHLLQ6RSH7 139 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SPOCD1Q6ZMY3 1216 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 BTLAQ7Z6A9 289 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 OSTM1Q86WC4 334 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 MARVELD2Q8N4S9 558 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CNTD1Q8N815 330 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CXorf38Q8TB03 319 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CPT1BQ92523 772 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 KLK6Q92876 244 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 BHMTQ93088 406 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 DYDC2Q96IM9 177 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PWWP2AQ96N64 755 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 MAP3K3Q99759 626 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 UCK2Q9BZX2 261 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CHST8Q9H2A9 424 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 MTG2Q9H4K7 406 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ZMAT3Q9HA38 289 aaKnown RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 BARX1Q9HBU1 254 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 EML4Q9HC35 981 aaKnown RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ZBTB20Q9HC78 741 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 SARS2Q9NP81 518 aaKnown RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PLCB1Q9NQ66 1216 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 OLA1Q9NTK5 396 aaKnown RBP3.41□□□□□ -1.86
CCDC7-213ENST00000639290 P4HTMQ9NXG6 502 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 ZDHHC3Q9NYG2 299 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 IP6K2Q9UHH9 426 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 PCDHB14Q9Y5E9 798 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 CSAG2Q9Y5P2 127 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 FHOD1Q9Y613 1164 aa3.41□□□□□ -1.86
CCDC7-213ENST00000639290 AGPSO00116 658 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 OIP5O43482 229 aa3.4□□□□□ -1.86
CCDC7-213ENST00000639290 USP1O94782 785 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms