RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 LRRC45Q96CN5 670 aa21.53■■□□□ 1.04
SCN1B-206ENST00000638536 NAPGQ99747 312 aaPredicted RBP21.53■■□□□ 1.04
SCN1B-206ENST00000638536 GSDMCQ9BYG8 508 aa21.53■■□□□ 1.04
SCN1B-206ENST00000638536 DMXL2Q8TDJ6 3036 aa21.53■■□□□ 1.04
SCN1B-206ENST00000638536 CHUKO15111 745 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 GRID2O43424 1007 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 SRP72O76094 671 aaKnown RBP21.52■■□□□ 1.04
SCN1B-206ENST00000638536 ACP5P13686 325 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 TCP1P17987 556 aaKnown RBP21.52■■□□□ 1.04
SCN1B-206ENST00000638536 ACTR1BP42025 376 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 CDKN1CP49918 316 aaPredicted RBP21.52■■□□□ 1.04
SCN1B-206ENST00000638536 ACTR1AP61163 376 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 INSM1Q01101 510 aaPredicted RBP21.52■■□□□ 1.04
SCN1B-206ENST00000638536 TMEM115Q12893 351 aaPredicted RBP21.52■■□□□ 1.04
SCN1B-206ENST00000638536 GPRC6AQ5T6X5 926 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 CRTC3Q6UUV7 619 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 PPP1R21Q6ZMI0 780 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 NAGSQ8N159 534 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 GDAP1Q8TB36 358 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 ZNF778Q96MU6 729 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 NAP1L3Q99457 506 aaPredicted RBP21.52■■□□□ 1.04
SCN1B-206ENST00000638536 KCNK6Q9Y257 313 aa21.52■■□□□ 1.04
SCN1B-206ENST00000638536 MROH6A6NGR9 719 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 PHF2O75151 1096 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 CDK14O94921 469 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 KRT14P02533 472 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 ARSDP51689 593 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 ILKQ13418 452 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 PLA2G4EQ3MJ16 856 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 ZDHHC1Q8WTX9 485 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 ASB8Q9H765 288 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 NLE1Q9NVX2 485 aaPredicted RBP21.51■■□□□ 1.03
SCN1B-206ENST00000638536 FAM221BA6H8Z2 402 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 DUSP3P51452 185 aaPredicted RBP21.51■■□□□ 1.03
SCN1B-206ENST00000638536 CTSCP53634 463 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 MAZP56270 477 aaKnown RBP21.51■■□□□ 1.03
SCN1B-206ENST00000638536 GPS1Q13098 491 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 NFATC2Q13469 925 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 HES3Q5TGS1 186 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 ZNF534Q76KX8 674 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 RASGEF1AQ8N9B8 481 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 DDHD1Q8NEL9 900 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 GLMNQ92990 594 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 DDX47Q9H0S4 455 aaKnown RBP21.51■■□□□ 1.03
SCN1B-206ENST00000638536 RMI1Q9H9A7 625 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 SMOXQ9NWM0 555 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 SLC2A6Q9UGQ3 507 aa21.51■■□□□ 1.03
SCN1B-206ENST00000638536 TRBV23OR9-2A0A075B6M9 112 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 AGAP14A8MT82 685 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 ECEL1O95672 775 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 MC4RP32245 332 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 CRADDP78560 199 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 PDE1BQ01064 536 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 ITGA9Q13797 1035 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 HLTFQ14527 1009 aaKnown RBP eCLIP21.5■■□□□ 1.03
SCN1B-206ENST00000638536 ANKRD22Q5VYY1 191 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 C11orf96Q7Z7L8 435 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 C17orf82Q86X59 251 aaPredicted RBP21.5■■□□□ 1.03
SCN1B-206ENST00000638536 CDKN2AIPNLQ96HQ2 116 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 EIF2B3Q9NR50 452 aaKnown RBP21.5■■□□□ 1.03
SCN1B-206ENST00000638536 TBC1D29Q9UFV1 150 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 APPL1Q9UKG1 709 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 SAR1BQ9Y6B6 198 aa21.5■■□□□ 1.03
SCN1B-206ENST00000638536 CTAGE9A4FU28 777 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 OR51F1A6NGY5 319 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 VEGFDO43915 354 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 OPA1O60313 960 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 GP1BAP07359 652 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 RPIAP49247 311 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 B4GALNT1Q00973 533 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 KCNJ11Q14654 390 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 C14orf28Q4W4Y0 310 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 C4orf22Q6V702 233 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 STYXQ8WUJ0 223 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 CCDC74AQ96AQ1 378 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 TMEM121BQ9BXQ6 578 aaPredicted RBP21.49■■□□□ 1.03
SCN1B-206ENST00000638536 NCKIPSDQ9NZQ3 722 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 MSRB2Q9Y3D2 182 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 NEUROG3Q9Y4Z2 214 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 RNF215Q9Y6U7 377 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 ZFHX4Q86UP3 3567 aa21.49■■□□□ 1.03
SCN1B-206ENST00000638536 PSMA3P25788 255 aa21.48■■□□□ 1.03
SCN1B-206ENST00000638536 HADHAP40939 763 aa21.48■■□□□ 1.03
SCN1B-206ENST00000638536 SESN2P58004 480 aaPredicted RBP21.48■■□□□ 1.03
SCN1B-206ENST00000638536 LRP8Q14114 963 aa21.48■■□□□ 1.03
SCN1B-206ENST00000638536 CCNI2Q6ZMN8 369 aaPredicted RBP21.48■■□□□ 1.03
SCN1B-206ENST00000638536 OR13J1Q8NGT2 312 aa21.48■■□□□ 1.03
SCN1B-206ENST00000638536 CCDC3Q9BQI4 270 aa21.48■■□□□ 1.03
SCN1B-206ENST00000638536 KLC4Q9NSK0 619 aa21.48■■□□□ 1.03
SCN1B-206ENST00000638536 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.47■■□□□ 1.03
SCN1B-206ENST00000638536 H7C0S8 307 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 FNTAP49354 379 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 LDLRAP1Q5SW96 308 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 DET1Q7L5Y6 550 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 LRRTM4Q86VH4 590 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 PIANPQ8IYJ0 282 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 ARL14Q8N4G2 192 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 BEND7Q8N7W2 519 aaPredicted RBP21.47■■□□□ 1.03
SCN1B-206ENST00000638536 MAPK15Q8TD08 544 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 CPT1BQ92523 772 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms