RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 VPS39Q96JC1 886 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 NUAK2Q9H093 628 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 POLR3FQ9H1D9 316 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TMEM134Q9H6X4 195 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 CCNB1IP1Q9NPC3 277 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF277Q9NRM2 450 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 IARS2Q9NSE4 1012 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 STOML2Q9UJZ1 356 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TPRKBQ9Y3C4 175 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 HSPE1-MOB4S4R3N1 261 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 LINC00862A6NCI5 91 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 KRT87PA6NCN2 255 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 KCNJ13O60928 360 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 USP12O75317 370 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 ALOX12P18054 663 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CYP2F1P24903 491 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 MLLT3P42568 568 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 MAGEA11P43364 429 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 SESN2P58004 480 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 SLC35A2P78381 396 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 POU6F2P78424 691 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CRADDP78560 199 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 PIGFQ07326 219 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 RIPPLY1Q0D2K3 151 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 DPYSL2Q16555 572 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 OTUD3Q5T2D3 398 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 TSTD2Q5T7W7 516 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 NXNL2Q5VZ03 156 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CNSTQ6PJW8 725 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 SCARA5Q6ZMJ2 495 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 PRR23BQ6ZRT6 265 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 RBM23Q86U06 439 aaKnown RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 FSTL5Q8N475 847 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 RPL3LQ92901 407 aaKnown RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 TMBIM1Q969X1 311 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 LRRC58Q96CX6 371 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 ZDHHC15Q96MV8 337 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 GAD1Q99259 594 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 AMBRA1Q9C0C7 1298 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 ALG2Q9H553 416 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 EHD3Q9NZN3 535 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 TLR6Q9Y2C9 796 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 PCDHA10Q9Y5I2 948 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 PDHXO00330 501 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 PEX14O75381 377 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 TRIM3O75382 744 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 EPN2O95208 641 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 STBD1O95210 358 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CD19P15391 556 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 AGXTP21549 392 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CACNB3P54284 484 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 LSM3P62310 102 aaKnown RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 BAMBIQ13145 260 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 DUOXA2Q1HG44 320 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 RFX4Q33E94 735 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 PYCR3Q53H96 274 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CES5AQ6NT32 575 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 XRRA1Q6P2D8 792 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 ZDHHC13Q8IUH4 622 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 COLGALT1Q8NBJ5 622 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 APPL2Q8NEU8 664 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 MCOLN3Q8TDD5 553 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 MOCOSQ96EN8 888 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 DMRTB1Q96MA1 342 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 MRPL57Q9BQC6 102 aaKnown RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 UGT2B28Q9BY64 529 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 CAB39LQ9H9S4 337 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 TJP2Q9UDY2 1190 aa11.92□□□□□ -0.5
CAPN3-221ENST00000638141 FNDC1Q4ZHG4 1894 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-221ENST00000638141 A0A0J9YYE9 177 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 FAM92AA1XBS5 289 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 CDK14O94921 469 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 GH2P01242 217 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 TCF3P15923 654 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 STMN1P16949 149 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF30P17039 623 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ATP5F1P24539 256 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 DNAJB2P25686 324 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SLC15A1P46059 708 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 MRPL19P49406 292 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ETV1P50549 477 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 TFAMQ00059 246 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 FAPQ12884 760 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF699Q32M78 642 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 OR9I1Q8NGQ6 314 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 BIRC7Q96CA5 298 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SCYL1Q96KG9 808 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 FCRL3Q96P31 734 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 RBM4BQ9BQ04 359 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 SNRNP25Q9BV90 132 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 RBM4Q9BWF3 364 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 BCO2Q9BYV7 579 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 ROGDIQ9GZN7 287 aa11.91□□□□□ -0.5
CAPN3-221ENST00000638141 REXO4Q9GZR2 422 aaKnown RBP11.91□□□□□ -0.5
CAPN3-221ENST00000638141 HAPLN2Q9GZV7 340 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms