RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 FTCDO95954 541 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 HMGCLP35914 325 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 PPM1FP49593 454 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 PLA2G4EQ3MJ16 856 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 BROXQ5VW32 411 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 CLEC14AQ86T13 490 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 ZNF761Q86XN6 746 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 JAMLQ86YT9 394 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 SLITRK4Q8IW52 837 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 GDAP1Q8TB36 358 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 SLC38A3Q99624 504 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 ZMYND15Q9H091 742 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 OSGEPL1Q9H4B0 414 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 STN1Q9H668 368 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 IGSF10Q6WRI0 2623 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 IGHV1OR21-1A0A087WYE8 117 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 GOLGA6L9A6NEM1 432 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 GPR89AB7ZAQ6 455 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 BUD23O43709 281 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 AGTP01019 485 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 GPR89BP0CG08 455 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 SLC2A4P14672 509 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 PSMB4P28070 264 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 CD1CP29017 333 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 SPAM1P38567 509 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 FASLGP48023 281 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 HHEXQ03014 270 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 PRPSAP1Q14558 356 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 CLPPQ16740 277 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 INSCQ1MX18 579 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 ATP13A5Q4VNC0 1218 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 ANKRD20A2Q5SQ80 823 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 ANKRD20A1Q5TYW2 823 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 ANKRD20A3Q5VUR7 823 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 NKAIN2Q5VXU1 208 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 ZDHHC20Q5W0Z9 365 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 TMEM159Q96B96 161 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 FCRL3Q96P31 734 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 VPS35Q96QK1 796 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 CMKLR1Q99788 373 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 GORASP1Q9BQQ3 440 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 PRORYQ9H606 182 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 IL26Q9NPH9 171 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 KLC4Q9NSK0 619 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 AKAP7Q9P0M2 348 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 IL17CQ9P0M4 197 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 PKP3Q9Y446 797 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
CACNA1A-259ENST00000638114 CHUKO15111 745 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 KMOO15229 486 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 VEGFDO43915 354 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 CDK14O94921 469 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 F3P13726 295 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 ITIH1P19827 911 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 NFATC2Q13469 925 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 KHDC1Q4VXA5 237 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 IYDQ6PHW0 289 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 FAM151BQ6UXP7 276 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 SLC9B2Q86UD5 537 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 LRRTM4Q86VH4 590 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 CCDC110Q8TBZ0 833 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 CCDC97Q96F63 343 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 AHCYL2Q96HN2 611 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 SPATA13Q96N96 652 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 APOL2Q9BQE5 337 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 DPH1Q9BZG8 443 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 WDR70Q9NW82 654 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 TMPRSS11EQ9UL52 423 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 AAR2Q9Y312 384 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
CACNA1A-259ENST00000638114 KIR2DS5A0A0G2JLQ3 304 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 A0A0G2JNG1 304 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 IGHV5-10-1A0A0J9YXX1 117 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 GLYATL1P3A0A0U1RQE8 302 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 A6NCN8 305 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 KIR2DS3K7RE56 304 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 DDX3YO15523 660 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 ZNF7P17097 686 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 SLC5A2P31639 672 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 CSF2RBP32927 897 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 MAPK10P53779 464 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 CXADRP78310 365 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 GPLD1P80108 840 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 OLIG2Q13516 323 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 GTF2H3Q13889 308 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 KIR2DS5Q14953 304 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 C16orf72Q14CZ0 275 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 CHRNA6Q15825 494 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 ZNF574Q6ZN55 896 aaPredicted RBP16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 TTC13Q8NBP0 860 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 RCBTB1Q8NDN9 531 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 OR10G6Q8NH81 332 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 CCDC74BQ96LY2 380 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 TTC25Q96NG3 672 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 SARS2Q9NP81 518 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 PRDM8Q9NQV8 689 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 SLC23A2Q9UGH3 650 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms