RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ADAMTS9Q9P2N4 1935 aa15.84■□□□□ 0.13
CLN6-216ENST00000636876 LNP1A1A4G5 178 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 PRSS38A1L453 326 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 CD3EAPO15446 510 aaKnown RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 VEGFDO43915 354 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 MTX2O75431 263 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 IVLP07476 585 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 ACRV1P26436 265 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 MAGEA4P43358 317 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 POLD2P49005 469 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 SRP54P61011 504 aaKnown RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 DBN1Q16643 649 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 HLA-BQ31612 363 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 FASTKD1Q53R41 847 aaKnown RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 ZNF648Q5T619 568 aaPredicted RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 LYPLAL1Q5VWZ2 237 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 KCTD16Q68DU8 428 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 GPR161Q8N6U8 529 aaKnown RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 EIF1ADQ8N9N8 165 aaKnown RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 UBXN4Q92575 508 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 TSACCQ96A04 125 aaPredicted RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 PDXPQ96GD0 296 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 SCARF2Q96GP6 870 aaPredicted RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 ELF4Q99607 663 aaPredicted RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 COPS8Q99627 209 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 ZCCHC2Q9C0B9 1178 aaKnown RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 OR2AG1Q9H205 316 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 C20orf96Q9NUD7 363 aaPredicted RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 DNAJC28Q9NX36 388 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 ZDHHC3Q9NYG2 299 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 IL1RAPL1Q9NZN1 696 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 MARCH4Q9P2E8 410 aaPredicted RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 ATXN10Q9UBB4 475 aa15.83■□□□□ 0.12
CLN6-216ENST00000636876 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLN6-216ENST00000636876 V9GYY5 206 aaPredicted RBP15.83■□□□□ 0.12
CLN6-216ENST00000636876 IGLV3-16A0A075B6K0 115 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 GOLGA8KD6RF30 607 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 GOLGA8TH3BQL2 631 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 DFNA5O60443 496 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 FOXD2O60548 495 aaPredicted RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 RASGRP1O95267 797 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 CER1O95813 267 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 CSF2P04141 144 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 NME1P15531 152 aaKnown RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 TNFRSF8P28908 595 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 AKT1P31749 480 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 RXRGP48443 463 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 PPARDQ03181 441 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 TMEM115Q12893 351 aaPredicted RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 THOC5Q13769 683 aaKnown RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 FRG1Q14331 258 aaKnown RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 SEMA3AQ14563 771 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 SMAD1Q15797 465 aaKnown RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 ZNF542PQ5EBM4 170 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 AARS2Q5JTZ9 985 aaKnown RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 PRAMEF14Q5SWL7 426 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 MRNIPQ6NTE8 343 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 NEPROQ6NW34 567 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 CERS6Q6ZMG9 384 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 HID1Q8IV36 788 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 PHACTR4Q8IZ21 702 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 UNC5BQ8IZJ1 945 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 OTUD6BQ8N6M0 293 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 GPR150Q8NGU9 434 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 C9orf72Q96LT7 481 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 TTC1Q99614 292 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 GTPBP2Q9BX10 602 aaKnown RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 GAREM1Q9H706 876 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 CYP4F12Q9HCS2 524 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 MRPL40Q9NQ50 206 aaKnown RBP15.82■□□□□ 0.12
CLN6-216ENST00000636876 KLF15Q9UIH9 416 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 MOSPD1Q9UJG1 213 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 DGKBQ9Y6T7 804 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 TMEM131Q92545 1883 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 LRP4O75096 1905 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 SPTBN2O15020 2390 aa15.82■□□□□ 0.12
CLN6-216ENST00000636876 A0A1B0GTQ1 180 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 GPR89AB7ZAQ6 455 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 NUAK1O60285 661 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 CDK14O94921 469 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 FUCA1P04066 466 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 GPR89BP0CG08 455 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 ZNF8P17098 575 aaPredicted RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 JUNDP17535 347 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 MSH3P20585 1137 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 ARRB1P49407 418 aaPredicted RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 BLKP51451 505 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 HK3P52790 923 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 ATXN3P54252 364 aaPredicted RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 B4GALNT1Q00973 533 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 ITIH4Q14624 930 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 PRR23CQ6ZRP0 262 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 MARK2Q7KZI7 788 aaKnown RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 RD3Q7Z3Z2 195 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 KCNMB4Q86W47 210 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 RELL1Q8IUW5 271 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 PALM2Q8IXS6 379 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 LMNTD2Q8IXW0 634 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 MINDY1Q8N5J2 469 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 PNPLA1Q8N8W4 532 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms