RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TRAM1L1Q8N609 369 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 OTUD6BQ8N6M0 293 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 PRELID2Q8N945 189 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 GPR26Q8NDV2 337 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 PPHLN1Q8NEY8 458 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 OR4K2Q8NGD2 314 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 OR52K1Q8NGK4 314 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 SAP25Q8TEE9 199 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 OR1E3Q8WZA6 343 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 RTP4Q96DX8 246 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 PLEKHG4BQ96PX9 1271 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 OR2M4Q96R27 311 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 GORASP1Q9BQQ3 440 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 LRRC61Q9BV99 259 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 DUSP23Q9BVJ7 150 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 LGR4Q9BXB1 951 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 TEX101Q9BY14 249 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 ZMYND15Q9H091 742 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 SYNDIG1Q9H7V2 258 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 FGF22Q9HCT0 170 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 MRPL40Q9NQ50 206 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 GPR27Q9NS67 375 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 UCKL1Q9NWZ5 548 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 NLGN3Q9NZ94 848 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 SIRPGQ9P1W8 387 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 ASIC3Q9UHC3 531 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 ZNHIT2Q9UHR6 403 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 CRLS1Q9UJA2 301 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 PCOLCE2Q9UKZ9 415 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 DRG1Q9Y295 367 aaKnown RBP7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 BTBD3Q9Y2F9 522 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 TMEM98Q9Y2Y6 226 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 ARL5AQ9Y689 179 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 SLC30A1Q9Y6M5 507 aa7.17□□□□□ -1.26
NPLOC4-221ENST00000625705 FADS2P1A8MWK0 482 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 B4DGG1 531 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 AP3B1O00203 1094 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 TNFRSF10CO14798 259 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 GIPC1O14908 333 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 TNFSF14O43557 240 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 PRAMEF1O95521 474 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ITGALP20701 1170 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 TEAD1P28347 426 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ADRA1AP35348 466 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 COILP38432 576 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 POLD2P49005 469 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 FNTAP49354 379 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 DUSP3P51452 185 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 SESN2P58004 480 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ETF1P62495 437 aaKnown RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 PRAMEP78395 509 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 SEMA5AQ13591 1074 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 PEX6Q13608 980 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 SHBQ15464 509 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 INSCQ1MX18 579 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ZRANB3Q5FWF4 1079 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 PAPD7Q5XG87 772 aaKnown RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 PDPK2PQ6A1A2 396 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ZCCHC8Q6NZY4 707 aaKnown RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 CASC4Q6P4E1 433 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 SLC30A9Q6PML9 568 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 CRTC3Q6UUV7 619 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 RANBP10Q6VN20 620 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 TRAPPC5Q8IUR0 188 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 PELI3Q8N2H9 469 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 TTC30BQ8N4P2 665 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 GLIS1Q8NBF1 620 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 FAM46DQ8NEK8 389 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 OR4C6Q8NH72 309 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 BRSK1Q8TDC3 778 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 GLYATL1Q969I3 302 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 DCUN1D1Q96GG9 259 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 RUNDC3BQ96NL0 473 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 AGAP2Q99490 1192 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 GSDMCQ9BYG8 508 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 DDX47Q9H0S4 455 aaKnown RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 TCEAL2Q9H3H9 227 aaPredicted RBP7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 DPEP2Q9H4A9 486 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 OSGEPL1Q9H4B0 414 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ARFGAP3Q9NP61 516 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ZNF358Q9NW07 568 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 NCKIPSDQ9NZQ3 722 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 SAMD15Q9P1V8 674 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 APPL1Q9UKG1 709 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 SUFUQ9UMX1 484 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 GPR34Q9UPC5 381 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 CSNK1G3Q9Y6M4 447 aa7.16□□□□□ -1.26
NPLOC4-221ENST00000625705 HEATR9A2RTY3 570 aa7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 CPED1A4D0V7 1026 aa7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 LMO7DNF2Z398 122 aa7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 CCDC188H7C350 402 aa7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 SIGLEC6O43699 453 aa7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 MTX2O75431 263 aa7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 URI1O94763 535 aaPredicted RBP7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 PROCP04070 461 aa7.15□□□□□ -1.26
NPLOC4-221ENST00000625705 IVLP07476 585 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms