RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ADM5C9JUS6 153 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 NADKO95544 446 aaPredicted RBP14.01□□□□□ -0.17
LDB3-209ENST00000623056 CYBBP04839 570 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 HLA-DQB2P05538 268 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 RAP2AP10114 183 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
LDB3-209ENST00000623056 MTHFRP42898 656 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 IST1P53990 364 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 UFM1P61960 85 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 EMX2Q04743 252 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 PFKFB4Q16877 469 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ADPRMQ3LIE5 342 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ZDHHC13Q8IUH4 622 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 CILP2Q8IUL8 1156 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ZNF555Q8NEP9 628 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 OTUD5Q96G74 571 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ZNF560Q96MR9 790 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 RDH12Q96NR8 316 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 PDGFCQ9NRA1 345 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 AIG1Q9NVV5 245 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 PAK1IP1Q9NWT1 392 aaPredicted RBP14.01□□□□□ -0.17
LDB3-209ENST00000623056 MAGEL2Q9UJ55 1249 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 UBQLN1Q9UMX0 589 aaKnown RBP14.01□□□□□ -0.17
LDB3-209ENST00000623056 ATP11BQ9Y2G3 1177 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 PMF1-BGLAPU3KQ54 211 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ZNF99A8MXY4 864 aaPredicted RBP14.01□□□□□ -0.17
LDB3-209ENST00000623056 FAM47E-STBD1D6RA91 191 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 G3V2T6 193 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 M0R3G1 203 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 MGEA5O60502 916 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 CAPN15O75808 1086 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 CD1DP15813 335 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 SLC26A3P40879 764 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 CXCR3P49682 368 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 CLCQ05315 142 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 MAPK11Q15759 364 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 PCSK7Q16549 785 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 TIGD2Q4W5G0 525 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ARMCX2Q7L311 632 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 GPRIN1Q7Z2K8 1008 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 LIMS2Q7Z4I7 341 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 SPATA19Q7Z5L4 167 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 RAB44Q7Z6P3 723 aaPredicted RBP14.01□□□□□ -0.17
LDB3-209ENST00000623056 ARHGAP12Q8IWW6 846 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 DTWD1Q8N5C7 304 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 OR6Q1Q8NGQ2 317 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ITFG1Q8TB96 612 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 EDEM1Q92611 657 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 FEM1AQ9BSK4 669 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 LRRC3Q9BY71 257 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 ALOXE3Q9BYJ1 711 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 GOLGA2P5Q9HBQ8 144 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 NAALAD2Q9Y3Q0 740 aa14.01□□□□□ -0.17
LDB3-209ENST00000623056 PTGES3LE9PB15 166 aa14□□□□□ -0.17
LDB3-209ENST00000623056 SLC1A7O00341 560 aa14□□□□□ -0.17
LDB3-209ENST00000623056 SLC22A1O15245 554 aa14□□□□□ -0.17
LDB3-209ENST00000623056 NOBOXO60393 691 aa14□□□□□ -0.17
LDB3-209ENST00000623056 MAN1A2O60476 641 aa14□□□□□ -0.17
LDB3-209ENST00000623056 VPS4BO75351 444 aa14□□□□□ -0.17
LDB3-209ENST00000623056 SOAT2O75908 522 aa14□□□□□ -0.17
LDB3-209ENST00000623056 RECQL4O94761 1208 aa14□□□□□ -0.17
LDB3-209ENST00000623056 SLC4A1P02730 911 aa14□□□□□ -0.17
LDB3-209ENST00000623056 LGALS2P05162 132 aa14□□□□□ -0.17
LDB3-209ENST00000623056 ENO2P09104 434 aaPredicted RBP14□□□□□ -0.17
LDB3-209ENST00000623056 USP17L7P0C7H9 530 aa14□□□□□ -0.17
LDB3-209ENST00000623056 AKAP5P24588 427 aa14□□□□□ -0.17
LDB3-209ENST00000623056 ALDH4A1P30038 563 aa14□□□□□ -0.17
LDB3-209ENST00000623056 POLR2JP52435 117 aaKnown RBP14□□□□□ -0.17
LDB3-209ENST00000623056 ZNF135P52742 658 aaPredicted RBP14□□□□□ -0.17
LDB3-209ENST00000623056 TOP3AQ13472 1001 aaPredicted RBP14□□□□□ -0.17
LDB3-209ENST00000623056 OR4D1Q15615 310 aa14□□□□□ -0.17
LDB3-209ENST00000623056 DGUOKQ16854 277 aa14□□□□□ -0.17
LDB3-209ENST00000623056 FAM98BQ52LJ0 330 aaKnown RBP14□□□□□ -0.17
LDB3-209ENST00000623056 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
LDB3-209ENST00000623056 PM20D1Q6GTS8 502 aa14□□□□□ -0.17
LDB3-209ENST00000623056 ALKAL1Q6UXT8 129 aa14□□□□□ -0.17
LDB3-209ENST00000623056 TRIB2Q92519 343 aa14□□□□□ -0.17
LDB3-209ENST00000623056 CCDC90BQ9GZT6 254 aa14□□□□□ -0.17
LDB3-209ENST00000623056 NXF3Q9H4D5 531 aaKnown RBP14□□□□□ -0.17
LDB3-209ENST00000623056 CCL22O00626 93 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 MAFKO60675 156 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 SLC22A3O75751 556 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 CNTN5O94779 1100 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 S1PR4O95977 384 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 PRR35P0CG20 571 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 TCEA1P23193 301 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 WARSP23381 471 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 TAF6P49848 677 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 LSM3P62310 102 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 ILF2Q12905 390 aaKnown RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 KCNAB2Q13303 367 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 TMEM236Q5W0B7 351 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 ANKRD34AQ69YU3 496 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 SLC27A1Q6PCB7 646 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 ADCK1Q86TW2 530 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 HS3ST5Q8IZT8 346 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 OR13J1Q8NGT2 312 aa13.99□□□□□ -0.17
LDB3-209ENST00000623056 GABPB2Q8TAK5 448 aaPredicted RBP13.99□□□□□ -0.17
LDB3-209ENST00000623056 FAR1Q8WVX9 515 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms