RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MYH10P35580 1976 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 VIRMAQ69YN4 1812 aaKnown RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 ACACAQ13085 2346 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 ABLIM1O14639 778 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 SMAD6O43541 496 aaKnown RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 AKAP10O43572 662 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 NARSO43776 548 aaKnown RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CER1O95813 267 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 SLC35G6P0C7Q6 338 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 VAV1P15498 845 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 TSPAN8P19075 237 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 KCNK10P57789 538 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CLDN10P78369 228 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 ILF2Q12905 390 aaKnown RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 INPP5AQ14642 412 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 FUT11Q495W5 492 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 GPR33Q49SQ1 333 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CHMP1BQ7LBR1 199 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 OTULINQ96BN8 352 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 MCCC1Q96RQ3 725 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CCDC177Q9NQR7 707 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CDYLQ9Y232 598 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 WDR90Q96KV7 1748 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 A0A0J9YVX5 310 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CCDC162PA2VCL2 907 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 SHISA7A6NL88 538 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 BTNL10A8MVZ5 291 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 SOCS5O75159 536 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 CRYMQ14894 314 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 SLC1A5Q15758 541 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 Q6ZSR6 202 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 UMODL1-AS1Q8N2C9 162 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 RIBC1Q8N443 379 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 ZSCAN1Q8NBB4 408 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 HIC2Q96JB3 615 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 RPP25Q9BUL9 199 aaKnown RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 ROPN1BQ9BZX4 212 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 ROPN1Q9HAT0 212 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-229ENST00000622668 IL21RQ9HBE5 538 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 HRASLS2Q9NWW9 162 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 OSER1Q9NX31 292 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 OGFRQ9NZT2 677 aa9.01□□□□□ -0.97
HDAC9-229ENST00000622668 PRAMEF26H0Y7S4 382 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 LDB2O43679 373 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 MPOP05164 745 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 HSD17B3P37058 310 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 GABRB2P47870 512 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ANXA11P50995 505 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 ALDH18A1P54886 795 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 DEFB133Q30KQ1 61 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 SIRPB2Q5JXA9 342 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 IL27RAQ6UWB1 636 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 PAQR9Q6ZVX9 377 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CPNE9Q8IYJ1 553 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CPXM2Q8N436 756 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 NIPA2Q8N8Q9 360 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 DDX1Q92499 740 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 NAF1Q96HR8 494 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 ATP6V1G3Q96LB4 118 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 TUBGCP5Q96RT8 1024 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 PEBP4Q96S96 227 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 WWP1Q9H0M0 922 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 HCN2Q9UL51 889 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 REXO2Q9Y3B8 237 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 LATO43561 262 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 HS6ST1O60243 411 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 FKBP9O95302 570 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 GSRP00390 522 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 HMGA1P17096 107 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 SLC6A4P31645 630 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CDH5P33151 784 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 HNF1BP35680 557 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 PREPP48147 710 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 GPRC6AQ5T6X5 926 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 LRRC8BQ6P9F7 803 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 FKBP9P1Q75LS8 142 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CEP70Q8NHQ1 597 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 KCTD4Q8WVF5 259 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CDKN2AIPNLQ96HQ2 116 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 RSRC1Q96IZ7 334 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 PKNOX2Q96KN3 472 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 LENG8Q96PV6 779 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 THUMPD3Q9BV44 507 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 TTLL2Q9BWV7 592 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CSNK1G1Q9HCP0 422 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 FAM32AQ9Y421 112 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 ACTL7AQ9Y615 435 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 OR1F1O43749 312 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 PGLSO95336 258 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 METTL18O95568 372 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ENO3P13929 434 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 TSHRP16473 764 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 DPP6P42658 865 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 PTGER3P43115 390 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 GALNT2Q10471 571 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 COL9A2Q14055 689 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 FBXO48Q5FWF7 155 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 BEND6Q5SZJ8 279 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 MPP7Q5T2T1 576 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms