RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 C2orf78A6NCI8 922 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 HEPACAM2A8MVW5 462 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 RFXANKO14593 260 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 SNX3O60493 162 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 NIPSNAP2O75323 286 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 SNRPB2P08579 225 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 INTS11Q5TA45 600 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 ZNF776Q68DI1 518 aaPredicted RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 BHLHB9Q6PI77 547 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 PLD3Q8IV08 490 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 IQCKQ8N0W5 287 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 TTC9BQ8N6N2 239 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ZCCHC10Q8TBK6 192 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 GDPD5Q8WTR4 605 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 CRYGNQ8WXF5 182 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 TRMOQ9BU70 441 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 TTLL2Q9BWV7 592 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 TRIT1Q9H3H1 467 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 FANCEQ9HB96 536 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 EQTNQ9NQ60 294 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 OSER1Q9NX31 292 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ZNF780BQ9Y6R6 833 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 STRCP1A6NGW2 1772 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 LTBP4Q8N2S1 1624 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 UBXN8O00124 270 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ALPPL2P10696 532 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 FOSL2P15408 326 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 MPSTP25325 297 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 RPL10P27635 214 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 SLC25A3Q00325 362 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 CYB5D1Q6P9G0 228 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 Q6ZVL8 140 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 DCAF4L2Q8NA75 395 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 PPCDCQ96CD2 204 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 BTBD9Q96Q07 612 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 OR52E6Q96RD3 313 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 TSC22D3Q99576 134 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 SRMSQ9H3Y6 488 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 DCLRE1BQ9H816 532 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 NOL11Q9H8H0 719 aaKnown RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 IL36AQ9UHA7 158 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ATP6V1HQ9UI12 483 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 SLCO3A1Q9UIG8 710 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ZNF490Q9ULM2 529 aaPredicted RBP9.17□□□□□ -0.94
GGA3-223ENST00000621870 CABIN1Q9Y6J0 2220 aa9.17□□□□□ -0.94
GGA3-223ENST00000621870 ANKRD66B4E2M5 251 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 OR1F1O43749 312 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 KCNH1O95259 989 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 BPGMP07738 259 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 ZNF8P17098 575 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 ITPKBP27987 946 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 VHLP40337 213 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 STK19P49842 368 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 PLA2G16P53816 162 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 MRPS22P82650 360 aaKnown RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 IL5RAQ01344 420 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 OLIG2Q13516 323 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 TAF1AQ15573 450 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 MYLK3Q32MK0 819 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 ALKBH2Q6NS38 261 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 C22orf39Q6P5X5 142 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 BRAT1Q6PJG6 821 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 IFNLR1Q8IU57 520 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 POMGNT2Q8NAT1 580 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 SIDT2Q8NBJ9 832 aaKnown RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 ACTRT2Q8TDY3 377 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 NUS1Q96E22 293 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 BDH2Q9BUT1 245 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 MYLK2Q9H1R3 596 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 SFXN1Q9H9B4 322 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 LEF1Q9UJU2 399 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 TMCO1Q9UM00 188 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 POLR3HQ9Y535 204 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 NUP98P52948 1817 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 RIF1Q5UIP0 2472 aaKnown RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 ZNF840PA6NDX5 716 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 SNTNA6NMZ2 147 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 B4DGG1 531 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 M0R3G1 203 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 SLC28A1O00337 649 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 TGM5O43548 720 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 KIF1CO43896 1103 aaKnown RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 CLCNKAP51800 687 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 WNT7BP56706 349 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 CHRNA6Q15825 494 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 PLEKHG4Q58EX7 1191 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 ARL13AQ5H913 290 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 CCNYL2Q5T2Q4 361 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 PRMT9Q6P2P2 845 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 PHC3Q8NDX5 983 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 ZNF514Q96K75 400 aaPredicted RBP9.16□□□□□ -0.94
GGA3-223ENST00000621870 ZNF599Q96NL3 588 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 FIZ1Q96SL8 496 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 RAD21L1Q9H4I0 556 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 SPHK2Q9NRA0 654 aa9.16□□□□□ -0.94
GGA3-223ENST00000621870 DDX18Q9NVP1 670 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms