RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PPM1HQ9ULR3 514 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 RNF112Q9ULX5 631 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 DHRS7Q9Y394 339 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 RAP2CQ9Y3L5 183 aa21.25■□□□□ 0.99
SPAST-204ENST00000621856 IGFBP4P22692 258 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 MPSTP25325 297 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 ITGB7P26010 798 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 SERPINB3P29508 390 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 MMP12P39900 470 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 CLCN7P51798 805 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 EGFLAMQ63HQ2 1017 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 DSG4Q86SJ6 1040 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 CLDN19Q8N6F1 224 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 STAG3L4Q8TBR4 150 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 AGR3Q8TD06 166 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 CSGALNACT1Q8TDX6 532 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 NAT14Q8WUY8 206 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 EEF1AKMT1Q8WVE0 214 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 ARRDC3Q96B67 414 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 PPP1R16AQ96I34 528 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 RILPQ96NA2 401 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 TMEM237Q96Q45 408 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 ABCG8Q9H221 673 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 DYRK4Q9NR20 520 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 NPEPPSL1A6NEC2 478 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 UBXN8O00124 270 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 BTN3A1O00481 513 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 KERAO60938 352 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 TRIM16O95361 564 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 EPHX1P07099 455 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 ELFN1P0C7U0 828 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 ETV3P41162 512 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 NSG1P42857 185 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 SCTRP47872 440 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 METAP1P53582 386 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 DCDC1P59894 354 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 PRKAA1Q13131 559 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 TSNQ15631 228 aaKnown RBP21.24■□□□□ 0.99
SPAST-204ENST00000621856 FBXL19Q6PCT2 694 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 Q6ZVL8 140 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 INPP5DQ92835 1189 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 SKA1Q96BD8 255 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 CNDP1Q96KN2 507 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 FAM129BQ96TA1 746 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 CACNA2D2Q9NY47 1150 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 ITM2BQ9Y287 266 aa21.24■□□□□ 0.99
SPAST-204ENST00000621856 PLXNA2O75051 1894 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 SUPT3HB4E1H0 165 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 CDC7O00311 574 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 ARNTLO00327 626 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 SUPT3HO75486 399 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 SLC25A14O95258 325 aaPredicted RBP21.23■□□□□ 0.99
SPAST-204ENST00000621856 SERPINB5P36952 375 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 SOX9P48436 509 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 GRIN2CQ14957 1233 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 ACOX1Q15067 660 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 HSF5Q4G112 596 aaPredicted RBP21.23■□□□□ 0.99
SPAST-204ENST00000621856 MACC1Q6ZN28 852 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 RAB44Q7Z6P3 723 aaPredicted RBP21.23■□□□□ 0.99
SPAST-204ENST00000621856 SMRP1Q8NCR6 262 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 LKAAEAR1Q8TD35 194 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 SCAMP4Q969E2 229 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 ERLEC1Q96DZ1 483 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 ATOH8Q96SQ7 321 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 ACOX2Q99424 681 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 SHCBP1LQ9BZQ2 653 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 STN1Q9H668 368 aaKnown RBP21.23■□□□□ 0.99
SPAST-204ENST00000621856 EPS15L1Q9UBC2 864 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 IKZF3Q9UKT9 509 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 SLC12A4Q9UP95 1085 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 TICRRQ7Z2Z1 1910 aa21.23■□□□□ 0.99
SPAST-204ENST00000621856 ANTXRLA6NF34 631 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 C1QTNF3-AMACRE9PGA6 284 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 GFAPP14136 432 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 NFKB2Q00653 900 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 BNIP1Q12981 228 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 HTR4Q13639 388 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 LIPIQ6XZB0 460 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 ALYREFQ86V81 257 aaKnown RBP21.22■□□□□ 0.99
SPAST-204ENST00000621856 MMAAQ8IVH4 418 aaKnown RBP21.22■□□□□ 0.99
SPAST-204ENST00000621856 LSMEM2Q8N112 164 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 PTGR2Q8N8N7 351 aaPredicted RBP21.22■□□□□ 0.99
SPAST-204ENST00000621856 WRAP53Q9BUR4 548 aaKnown RBP21.22■□□□□ 0.99
SPAST-204ENST00000621856 TTYH1Q9H313 450 aaPredicted RBP21.22■□□□□ 0.99
SPAST-204ENST00000621856 PRO3102Q9H379 93 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 DNAJC28Q9NX36 388 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 TSR3Q9UJK0 312 aaKnown RBP21.22■□□□□ 0.99
SPAST-204ENST00000621856 HCN2Q9UL51 889 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 REV3LO60673 3130 aa21.22■□□□□ 0.99
SPAST-204ENST00000621856 RGSL1A5PLK6 1076 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 SYCE1LA8MT33 242 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 SNUPNO95149 360 aaKnown RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 TSPAN12O95859 305 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 ALOX15P16050 662 aaPredicted RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 IMPDH1P20839 514 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 AKT1P31749 480 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 PSMD8P48556 350 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 RPL14P50914 215 aaKnown RBP21.21■□□□□ 0.99
SPAST-204ENST00000621856 ELP6Q0PNE2 266 aa21.21■□□□□ 0.99
SPAST-204ENST00000621856 ADGRE1Q14246 886 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms