RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 CST3P01034 146 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 HK2P52789 917 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 TAS2R41P59536 307 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 IL10RBQ08334 325 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 PLEKHA7Q6IQ23 1121 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 OFCC1Q8IZS5 231 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 RTL3Q8N8U3 475 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 RDH11Q8TC12 318 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ACMSDQ8TDX5 336 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 HMCESQ96FZ2 354 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 TMEM79Q9BSE2 394 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 TMEM27Q9HBJ8 222 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 PRDM8Q9NQV8 689 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 FBXL12Q9NXK8 326 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF624Q9P2J8 865 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 NPEPPSL1A6NEC2 478 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 XKRYO14609 159 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 LRIG2O94898 1065 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 IFNGP01579 166 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 TRBC1P01850 177 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 GJA1P17302 382 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 PLGLB1Q02325 96 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 DEF8Q6ZN54 512 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 BEND5Q7L4P6 421 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 FAM98AQ8NCA5 519 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 GRIP2Q9C0E4 1043 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 MIOSQ9NXC5 875 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 IL36AQ9UHA7 158 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 RNF225M0QZC1 329 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 WNT9AO14904 365 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 OR10H3O60404 316 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 ENTPD5O75356 428 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 S100GP29377 79 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 UGT2B15P54855 530 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 CASP9P55211 416 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 ADARP55265 1226 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 DAOAP59103 153 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 DCTN2Q13561 401 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 COL9A3Q14050 684 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SQLEQ14534 574 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 ITPRIPL2Q3MIP1 535 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 PMF1Q6P1K2 205 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SPATA6LQ8N4H0 392 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 ART4Q93070 314 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 VPS35Q96QK1 796 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 CDRT15Q96T59 188 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 GSDMCQ9BYG8 508 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 STRADBQ9C0K7 418 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 ATG10Q9H0Y0 220 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC25A51Q9H1U9 297 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 OR2AG1Q9H205 316 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 EDDM13A0A1B0GTR0 161 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 TRIM24O15164 1050 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 C4BPAP04003 597 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 LAMP2P13473 410 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 MMP8P22894 467 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 CSKP41240 450 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 DUSP3P51452 185 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 KRR1Q13601 381 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 LARS2Q15031 903 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 TCHHL1Q5QJ38 904 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 NET1Q7Z628 596 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 EXOC3L1Q86VI1 746 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 GKN2Q86XP6 184 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 POU5F2Q8N7G0 328 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 UXS1Q8NBZ7 420 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 PTCD2Q8WV60 388 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SPRTNQ9H040 489 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 CDH7Q9ULB5 785 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 NCANO14594 1321 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 ROBO3Q96MS0 1386 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 MAGEB3O15480 346 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 B3GALT2O43825 422 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 PDK4Q16654 411 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 ARSHQ5FYA8 562 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 TXNDC8Q6A555 127 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 AADACL2Q6P093 401 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 MED27Q6P2C8 311 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 KLHL24Q6TFL4 600 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 B3GNT6Q6ZMB0 384 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 CCDC103Q8IW40 242 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 LIX1Q8N485 282 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SUSD3Q96L08 255 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 OR52E6Q96RD3 313 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 KCTD15Q96SI1 283 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 OLFM1Q99784 485 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 C1orf50Q9BV19 199 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 LRMDAQ9H2I8 198 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 COMMD3-BMI1R4GMX3 469 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 CASZ1Q86V15 1759 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 IQCF5A8MTL0 148 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 MFSD11O43934 449 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 DLGAP3O95886 979 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 CCNFP41002 786 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SGCBQ16585 318 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC10A6Q3KNW5 377 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.72□□□□□ -0.851e-6■■■■■ 92.8
CLTCL1-211ENST00000621271 LPIN3Q9BQK8 851 aa9.72□□□□□ -0.85
CLTCL1-211ENST00000621271 SPATA9Q9BWV2 254 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms