RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 KLRC3Q07444 240 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 ILF2Q12905 390 aaKnown RBP5.08□□□□□ -1.6
MATR3-228ENST00000620916 KCNJ11Q14654 390 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 PDK2Q15119 407 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 PCBP1Q15365 356 aaKnown RBP eCLIP5.08□□□□□ -1.6
MATR3-228ENST00000620916 TRIP10Q15642 601 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 FGD3Q5JSP0 725 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 ADGRF1Q5T601 910 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 SULT1C3Q6IMI6 304 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 BLOC1S2Q6QNY1 142 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 ZPBP2Q6X784 338 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 MOB2Q70IA6 237 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 COPS6Q7L5N1 327 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 NECAB2Q7Z6G3 386 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 TIGD4Q8IY51 512 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 TRIM22Q8IYM9 498 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 C4orf33Q8N1A6 199 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 MPP5Q8N3R9 675 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 RASGEF1CQ8N431 466 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 ABHD11Q8NFV4 315 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 PSMA8Q8TAA3 256 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 GPKOWQ92917 476 aaPredicted RBP eCLIP5.08□□□□□ -1.65e-8■■□□□ 12.1
MATR3-228ENST00000620916 USP13Q92995 863 aaPredicted RBP5.08□□□□□ -1.6
MATR3-228ENST00000620916 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.08□□□□□ -1.66e-7■■■□□ 15.7
MATR3-228ENST00000620916 PTERQ96BW5 349 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 MAGED4Q96JG8 741 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 ZNF285Q96NJ3 590 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 GCNAQ96QF7 691 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 OSBPL11Q9BXB4 747 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 NPLQ9BXD5 320 aaPredicted RBP5.08□□□□□ -1.6
MATR3-228ENST00000620916 TMEM120AQ9BXJ8 343 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 GPR62Q9BZJ7 368 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 NIPAL2Q9H841 368 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 MINDY3Q9H8M7 445 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 ABCC13Q9NSE7 274 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 SMARCAL1Q9NZC9 954 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 NFKBIL1Q9UBC1 381 aaPredicted RBP5.08□□□□□ -1.6
MATR3-228ENST00000620916 INPP5FQ9Y2H2 1132 aa5.08□□□□□ -1.6
MATR3-228ENST00000620916 ZMYM2Q9UBW7 1377 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 A0A0B4J269 797 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 TTC26A0AVF1 554 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 J3KRW8 73 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 BUB1O43683 1085 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 DFNA5O60443 496 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 PEX10O60683 326 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 KCNK2O95069 426 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 CPNE6O95741 557 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 STSP08842 583 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 IL7P13232 177 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 GRK3P35626 688 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 EIF4A3P38919 411 aaKnown RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 DIO1P49895 249 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 GATMP50440 423 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 MAT1AQ00266 395 aaKnown RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 PRKD1Q15139 912 aaPredicted RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 KRT31Q15323 416 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 LRRC41Q15345 812 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 TEAD4Q15561 434 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 STXBP2Q15833 593 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 SSX2Q16385 188 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 SLC39A12Q504Y0 691 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 FAM98BQ52LJ0 330 aaKnown RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 PLEKHG4Q58EX7 1191 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 KIAA1755Q5JYT7 1200 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 BHLHB9Q6PI77 547 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 C17orf99Q6UX52 265 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 ZNF782Q6ZMW2 699 aaPredicted RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 MSANTD1Q6ZTZ1 278 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 TRMT10CQ7L0Y3 403 aaKnown RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 RBFAQ8N0V3 343 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 SIX6OS1Q8N1H7 587 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 PQLC1Q8N2U9 271 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 POU5F2Q8N7G0 328 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 ZHX1-C8orf76Q96EF9 292 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 DUS3LQ96G46 650 aaKnown RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 FUBP3Q96I24 572 aaKnown RBP eCLIP5.07□□□□□ -1.6
MATR3-228ENST00000620916 PPP3R2Q96LZ3 170 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 NSMCE2Q96MF7 247 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 LMF1Q96S06 567 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 PTPN18Q99952 460 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 DPYSL5Q9BPU6 564 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 ADPGKQ9BRR6 497 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 FAM213AQ9BRX8 229 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 DUSP26Q9BV47 211 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 YTHDF1Q9BYJ9 559 aaKnown RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 TRIM2Q9C040 744 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 EFCAB1Q9HAE3 211 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 COPRSQ9NQ92 184 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 DNAJC28Q9NX36 388 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 ZSWIM5Q9P217 1185 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 PCDHGB4Q9UN71 923 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 PCDHA13Q9Y5I0 950 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 PFASO15067 1338 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 EML1O00423 815 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 CAPN5O15484 640 aaPredicted RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 ARHGEF9O43307 516 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 TSPAN3O60637 253 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 UGDHO60701 494 aa5.07□□□□□ -1.6
MATR3-228ENST00000620916 IDH1O75874 414 aaKnown RBP5.07□□□□□ -1.6
MATR3-228ENST00000620916 SOX30O94993 753 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms