RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 PPP1R3EQ9H7J1 279 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 PDGFCQ9NRA1 345 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CYSLTR2Q9NS75 346 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 DDX43Q9NXZ2 648 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 KLHL13Q9P2N7 655 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 DNAJB4Q9UDY4 337 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 HPCAL4Q9UM19 191 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 B3GALT5Q9Y2C3 310 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 V9GYY5 206 aaPredicted RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 FEZF1A0PJY2 475 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ENO4A6NNW6 628 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 DDX39AO00148 427 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 SYNCRIPO60506 623 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 IFNB1P01574 187 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 KLKB1P03952 638 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ZFYP08048 801 aaPredicted RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 OR52Z1P0C646 297 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ERCC2P18074 760 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ACHEP22303 614 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 NMBRP28336 390 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 IL15P40933 162 aaPredicted RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 AMPHP49418 695 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CFHR1Q03591 330 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 MZT1Q08AG7 82 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 LPIN1Q14693 890 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 PNLIPRP3Q17RR3 467 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 HFEQ30201 348 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 FAM98BQ52LJ0 330 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 NHSL2Q5HYW2 709 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CCDC183Q5T5S1 534 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 NSUN5P2Q63ZY6 315 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ERN2Q76MJ5 926 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 LINGO2Q7L985 606 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CENPVQ7Z7K6 275 aaPredicted RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 DSG4Q86SJ6 1040 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CFAP57Q96MR6 1250 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CRAMP1Q96RY5 1269 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 MGME1Q9BQP7 344 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ZPBPQ9BS86 351 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 SLC25A23Q9BV35 468 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 NUP85Q9BW27 656 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 SPRY4Q9C004 299 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 SPATC1LQ9H0A9 340 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 MBNL1Q9NR56 388 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 PSD3Q9NYI0 1048 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 NINJ2Q9NZG7 142 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 LARSQ9P2J5 1176 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ZMAT5Q9UDW3 170 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CPSF3Q9UKF6 684 aaKnown RBP3.83□□□□□ -1.8
LRRC39-204ENST00000620882 ANGPTL3Q9Y5C1 460 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 PCDHGA5Q9Y5G8 931 aa3.83□□□□□ -1.8
LRRC39-204ENST00000620882 CPED1A4D0V7 1026 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 FAM86B1E9PN63 330 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 J3KR12 359 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 NARSO43776 548 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 PAHP00439 452 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 FAM86B2P0C5J1 330 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 FERP16591 822 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 MAPK3P27361 379 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 TKTP29401 623 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ATP5OP48047 213 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 FOXE3Q13461 319 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 PTK6Q13882 451 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 CBWD6Q4V339 395 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 EARS2Q5JPH6 523 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 CBWD3Q5JTY5 395 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 HECTD2Q5U5R9 776 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 HAUS6Q7Z4H7 955 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 FAM217AQ8IXS0 508 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 RASGEF1CQ8N431 466 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 DCLK2Q8N568 766 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 OR10S1Q8NGN2 331 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 LARP4BQ92615 738 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 MSI2Q96DH6 328 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 NLRP4Q96MN2 994 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 PRAM1Q96QH2 718 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 SMC6Q96SB8 1091 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 HAUS8Q9BT25 410 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 C1QTNF1Q9BXJ1 281 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 C1QTNF3Q9BXJ4 246 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 FUT8Q9BYC5 575 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 RTN4RQ9BZR6 473 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 EPB41L5Q9HCM4 733 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ACSS1Q9NUB1 689 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ANKRD10Q9NXR5 420 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 ERVK-11Q9UQG0 969 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 WNT6Q9Y6F9 365 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 IGSF1Q8N6C5 1336 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 LACTBL1A8MY62 500 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 KIF1CO43896 1103 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 RTN2O75298 545 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 BCAS2O75934 225 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 C1QL1O75973 258 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 MMP2P08253 660 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 CBSLP0DN79 551 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 CHRNB1P11230 501 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 RPS2P15880 293 aaKnown RBP3.82□□□□□ -1.8
LRRC39-204ENST00000620882 CBSP35520 551 aa3.82□□□□□ -1.8
LRRC39-204ENST00000620882 SLC16A2P36021 539 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms