RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NVLO15381 856 aaKnown RBP16.95■□□□□ 0.3
HMGN3-203ENST00000620514 APOC2P02655 101 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 COPS2P61201 443 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 OTUD4Q01804 1114 aaKnown RBP16.95■□□□□ 0.3
HMGN3-203ENST00000620514 HHEXQ03014 270 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 VAC14Q08AM6 782 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 SRSF6Q13247 344 aaKnown RBP16.95■□□□□ 0.3
HMGN3-203ENST00000620514 NFATC2Q13469 925 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 SQSTM1Q13501 440 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 PDPK2PQ6A1A2 396 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 PCSK4Q6UW60 755 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 ZFAND4Q86XD8 727 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 PHYKPLQ8IUZ5 450 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 ACTL9Q8TC94 416 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 SLC39A7Q92504 469 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 SRPK1Q96SB4 655 aaKnown RBP16.95■□□□□ 0.3
HMGN3-203ENST00000620514 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 OSBPL8Q9BZF1 889 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 KLC4Q9NSK0 619 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 ACSL6Q9UKU0 697 aa16.95■□□□□ 0.3
HMGN3-203ENST00000620514 SMG1Q96Q15 3661 aaKnown RBP16.95■□□□□ 0.3
HMGN3-203ENST00000620514 MACROD2A1Z1Q3 448 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 GRID2IPA4D2P6 1211 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 EIF4E1BA6NMX2 242 aaKnown RBP16.94■□□□□ 0.3
HMGN3-203ENST00000620514 BTNL10A8MVZ5 291 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 CHUKO15111 745 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 PJA2O43164 708 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 EFSO43281 561 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 BUD23O43709 281 aaKnown RBP16.94■□□□□ 0.3
HMGN3-203ENST00000620514 IPO7O95373 1038 aaKnown RBP16.94■□□□□ 0.3
HMGN3-203ENST00000620514 EPOP01588 193 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 THRAP10827 490 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 F3P13726 295 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 CTNNA2P26232 953 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 CA5AP35218 305 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 HMGCLP35914 325 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 PPM1FP49593 454 aaPredicted RBP16.94■□□□□ 0.3
HMGN3-203ENST00000620514 VAV2P52735 878 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 XRCC4Q13426 336 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 SLC1A5Q15758 541 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 ATP13A5Q4VNC0 1218 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 LRRC57Q8N9N7 239 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 BLOC1S5Q8TDH9 187 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 ALG3Q92685 438 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 PMEPA1Q969W9 287 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 PLEKHG4BQ96PX9 1271 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 OSGEPL1Q9H4B0 414 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 TRABDQ9H4I3 376 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 SARS2Q9NP81 518 aaKnown RBP16.94■□□□□ 0.3
HMGN3-203ENST00000620514 IL26Q9NPH9 171 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 AKAP7Q9P0M2 348 aaPredicted RBP16.94■□□□□ 0.3
HMGN3-203ENST00000620514 SCHIP1Q9P0W5 487 aaPredicted RBP16.94■□□□□ 0.3
HMGN3-203ENST00000620514 TRHDEQ9UKU6 1024 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 AHCTF1Q8WYP5 2266 aa16.94■□□□□ 0.3
HMGN3-203ENST00000620514 MGAQ8IWI9 3026 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 A0A0U1RQJ8 604 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 K7ENP7 123 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 HGSO14964 777 aaPredicted RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 GPR39O43194 453 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 AGTP01019 485 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 FGF3P11487 239 aaPredicted RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 CLCNKAP51800 687 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 GPLD1P80108 840 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 MPP3Q13368 585 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 TMEM71Q6P5X7 295 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 INO80CQ6PI98 192 aaPredicted RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 CCDC81Q6ZN84 652 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 SLC9B2Q86UD5 537 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 LRRTM4Q86VH4 590 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 TMEM139Q8IV31 216 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 ZNF547Q8IVP9 402 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 OR10G6Q8NH81 332 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 SNRNP27Q8WVK2 155 aaKnown RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 AHCYL2Q96HN2 611 aaKnown RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 CALR3Q96L12 384 aaKnown RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 VPS35Q96QK1 796 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 CCNL2Q96S94 520 aaPredicted RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 BAG1Q99933 345 aaPredicted RBP16.93■□□□□ 0.3
HMGN3-203ENST00000620514 FICDQ9BVA6 458 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 ZMYND15Q9H091 742 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 GBA3Q9H227 469 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 IL17CQ9P0M4 197 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 TRIM10Q9UDY6 481 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 DNAJC16Q9Y2G8 782 aa16.93■□□□□ 0.3
HMGN3-203ENST00000620514 KIR2DS5A0A0G2JLQ3 304 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 A0A0G2JNG1 304 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 CCDC66A2RUB6 948 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 GPR89AB7ZAQ6 455 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 KIR2DS3K7RE56 304 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 KMOO15229 486 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 UGT1A9O60656 530 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 CDK14O94921 469 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 GPR89BP0CG08 455 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 LIPCP11150 499 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 PYGMP11217 842 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 ZNF7P17097 686 aaPredicted RBP16.92■□□□□ 0.3
HMGN3-203ENST00000620514 UGT1A6P19224 532 aa16.92■□□□□ 0.3
HMGN3-203ENST00000620514 HLA-DPA1P20036 260 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms