RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PCDH12Q9NPG4 1184 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 AASDHPPTQ9NRN7 309 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 SLC9A3R1O14745 358 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 RHOQP17081 205 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 RGS1Q08116 209 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ACSM2AQ08AH3 577 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 HSPA14Q0VDF9 509 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 BIKQ13323 160 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ACSM2BQ68CK6 577 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 CLEC20AQ6ZU45 233 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 CEP68Q76N32 757 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 CIR1Q86X95 450 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 IZUMO1Q8IYV9 350 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 GPR21Q99679 349 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 PCDHAC1Q9H158 963 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 EPB41L1Q9H4G0 881 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ZDHHC2Q9UIJ5 367 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 IKZF3Q9UKT9 509 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 LOC100506127A0A0U1RQW1 187 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 GSAPA4D1B5 854 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 SLC25A12O75746 678 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 OAS1P00973 400 aaKnown RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 NRG1Q02297 640 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-208ENST00000620466 HERC3Q15034 1050 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 FIBCD1Q8N539 461 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 WDTC1Q8N5D0 677 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 OR2T12Q8NG77 320 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 CLHC1Q8NHS4 586 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 BORCS5Q969J3 196 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 C8orf4Q9NR00 106 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 MAT2BQ9NZL9 334 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 CNTN3Q9P232 1028 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 MAST2Q6P0Q8 1798 aa8.3□□□□□ -1.08
ALMS1-208ENST00000620466 ARL5CA6NH57 179 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PTSQ03393 145 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ZSWIM7Q19AV6 140 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 RTL3Q8N8U3 475 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF557Q8N988 423 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SLC35F5Q8WV83 523 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SMPD3Q9NY59 655 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF624Q9P2J8 865 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CARNS1A5YM72 827 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CENPXA8MT69 81 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 MT-ND1P03886 318 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TAS2R39P59534 338 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PABPC1LQ4VXU2 614 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SFT2D3Q587I9 215 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 IL23RQ5VWK5 629 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 R3HCC1LQ7Z5L2 792 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 RBM23Q86U06 439 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 FAM124AQ86V42 546 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 GALNT15Q8N3T1 639 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 STYXQ8WUJ0 223 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PPM1MQ96MI6 270 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 QRFPRQ96P65 431 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 POLE3Q9NRF9 147 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PTTG2Q9NZH5 202 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SIX4Q9UIU6 781 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 LYVE1Q9Y5Y7 322 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 A0A1B0GUL6 1792 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 H3BNX3 289 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 RFPL1O75677 317 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 IVDP26440 423 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PRKAG1P54619 331 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CCL23P55773 120 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TMEM63BQ5T3F8 832 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 DDI2Q5TDH0 399 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SLC25A24Q6NUK1 477 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 GALNT5Q7Z7M9 940 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CAND1Q86VP6 1230 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ZC3H7AQ8IWR0 971 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 HERPUD2Q9BSE4 406 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 KLHL31Q9H511 634 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 PIGVQ9NUD9 493 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ENOPH1Q9UHY7 261 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ZNF490Q9ULM2 529 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SQORQ9Y6N5 450 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 ADAMTSL3P82987 1691 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 USP54Q70EL1 1684 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TMEM233B4DJY2 109 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TLR5O60602 858 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SEC24AO95486 1093 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 XRCC1P18887 633 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 RPS9P46781 194 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 COPZ1P61923 177 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 IRF8Q02556 426 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TUSC3Q13454 348 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 KLHDC10Q6PID8 442 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 KLHL17Q6TDP4 642 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 FAM43BQ6ZT52 329 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SIDT2Q8NBJ9 832 aaKnown RBP8.29□□□□□ -1.08
ALMS1-208ENST00000620466 CEP44Q9C0F1 390 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TELO2Q9Y4R8 837 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 STX16-NPEPL1H3BU86 382 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 SGTAO43765 313 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 TLL1O43897 1013 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 FKTNO75072 461 aa8.29□□□□□ -1.08
ALMS1-208ENST00000620466 NTRK1P04629 796 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms