RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 GEMIN8Q9NWZ8 242 aaKnown RBP11.78□□□□□ -0.52
UPF3B-204ENST00000619445 CPNE7Q9UBL6 633 aa11.78□□□□□ -0.52
UPF3B-204ENST00000619445 KCNK6Q9Y257 313 aa11.78□□□□□ -0.52
UPF3B-204ENST00000619445 OAS3Q9Y6K5 1087 aaKnown RBP11.78□□□□□ -0.52
UPF3B-204ENST00000619445 MN1Q10571 1320 aaPredicted RBP11.77□□□□□ -0.53
UPF3B-204ENST00000619445 A0A0A6YYK5 440 aaPredicted RBP11.77□□□□□ -0.53
UPF3B-204ENST00000619445 A0A0U1RQS6 177 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 AGRPO00253 132 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 CHUKO15111 745 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 RAD1O60671 282 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 SNX2O60749 519 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 NDST3O95803 873 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 EPOP01588 193 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 KRT1P04264 644 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 XRCC1P18887 633 aaPredicted RBP11.77□□□□□ -0.53
UPF3B-204ENST00000619445 NFATC3Q12968 1075 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 ZBTB17Q13105 803 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 NFATC2Q13469 925 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 MAP7Q14244 749 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 TCEAL1Q15170 157 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 TBR1Q16650 682 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 INSCQ1MX18 579 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 CRTC2Q53ET0 693 aaPredicted RBP11.77□□□□□ -0.53
UPF3B-204ENST00000619445 TEX44Q53QW1 395 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 WASH2PQ6VEQ5 465 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 ATG14Q6ZNE5 492 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 PRICKLE2Q7Z3G6 844 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 TMC3Q7Z5M5 1100 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 LRRTM4Q86VH4 590 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 BMPERQ8N8U9 685 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 SLC45A3Q96JT2 553 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 AGAP3Q96P47 875 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 VPS35Q96QK1 796 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 SMIM14Q96QK8 99 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 TRIB3Q96RU7 358 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 VAT1Q99536 393 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 SLC12A9Q9BXP2 914 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 PACSIN1Q9BY11 444 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 ZCCHC2Q9C0B9 1178 aaKnown RBP11.77□□□□□ -0.53
UPF3B-204ENST00000619445 SLC25A18Q9H1K4 315 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 OR2AG1Q9H205 316 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 WASH6PQ9NQA3 447 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 ABHD10Q9NUJ1 306 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 POT1Q9NUX5 634 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 HACD3Q9P035 362 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 ATXN10Q9UBB4 475 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 PILRAQ9UKJ1 303 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 ZNF711Q9Y462 761 aa11.77□□□□□ -0.53
UPF3B-204ENST00000619445 BOD1L1Q8NFC6 3051 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 TRBV23OR9-2A0A075B6M9 112 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 C3orf70A6NLC5 250 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-204ENST00000619445 POLR1CO15160 346 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-204ENST00000619445 WISP1O95388 367 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 VIPP01282 170 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 ZNF8P17098 575 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-204ENST00000619445 CSRP3P50461 194 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 UBE2IP63279 158 aaKnown RBP11.76□□□□□ -0.53
UPF3B-204ENST00000619445 ABHD18Q0P651 414 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 GTF2H3Q13889 308 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 GALNT3Q14435 633 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 ANKS6Q68DC2 871 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 RFX6Q8HWS3 928 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 TADA1Q96BN2 335 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 RTP4Q96DX8 246 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 TTC25Q96NG3 672 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 OSGEPL1Q9H4B0 414 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 NHEJ1Q9H9Q4 299 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-204ENST00000619445 GPN2Q9H9Y4 310 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-204ENST00000619445 GLOD4Q9HC38 313 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 KLC4Q9NSK0 619 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 OCIAD1Q9NX40 245 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 PRKAB1Q9Y478 270 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 TMEM184BQ9Y519 407 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-204ENST00000619445 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
UPF3B-204ENST00000619445 KLHL33A6NCF5 533 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 PSTPIP1O43586 416 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 SPOPO43791 374 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 CDK14O94921 469 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 EML2O95834 649 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 FAM87AP0C7U9 286 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 ZNF7P17097 686 aaPredicted RBP11.75□□□□□ -0.53
UPF3B-204ENST00000619445 IDSP22304 550 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 MPSTP25325 297 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 HMGCLP35914 325 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 CCR10P46092 362 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 ARSDP51689 593 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 SRSF6Q13247 344 aaKnown RBP11.75□□□□□ -0.53
UPF3B-204ENST00000619445 IL11RAQ14626 422 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 SNAP47Q5SQN1 464 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 KLHL35Q6PF15 583 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 ABRAXAS1Q6UWZ7 409 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 TMEM26Q6ZUK4 368 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 ADGRG6Q86SQ4 1221 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 ZNF761Q86XN6 746 aaPredicted RBP11.75□□□□□ -0.53
UPF3B-204ENST00000619445 ESX1Q8N693 406 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 GPR26Q8NDV2 337 aa11.75□□□□□ -0.53
UPF3B-204ENST00000619445 TFB1MQ8WVM0 346 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms