RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 DCAF4L2Q8NA75 395 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 BHLHE22Q8NFJ8 381 aaPredicted RBP12.3□□□□□ -0.44
CIITA-212ENST00000618207 PIH1D2Q8WWB5 315 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 TCF25Q9BQ70 676 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 APOL5Q9BWW9 433 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 CXXC1Q9P0U4 656 aaPredicted RBP12.3□□□□□ -0.44
CIITA-212ENST00000618207 AK5Q9Y6K8 562 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 PLXNA4Q9HCM2 1894 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 NEDD8-MDP1E9PL57 170 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 NR5A2O00482 541 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 FKBP6O75344 327 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 HGFP14210 728 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 HNF1BP35680 557 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 SLC26A3P40879 764 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 PPP3CCP48454 512 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 SUOXP51687 545 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 CBX2Q14781 532 aaPredicted RBP12.3□□□□□ -0.44
CIITA-212ENST00000618207 PLEKHG6Q3KR16 790 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 GRAMD1BQ3KR37 738 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 UGT3A2Q3SY77 523 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 POM121L1PQ3SYA9 428 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 ANKS6Q68DC2 871 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 DHDDSQ86SQ9 333 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 TMEM25Q86YD3 366 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 RIN3Q8TB24 985 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 SERPINI1Q99574 410 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 ZNF184Q99676 751 aaPredicted RBP12.3□□□□□ -0.44
CIITA-212ENST00000618207 C1orf50Q9BV19 199 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 DERL2Q9GZP9 239 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 FAM8A1Q9UBU6 413 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 SLCO3A1Q9UIG8 710 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 PRSS21Q9Y6M0 314 aa12.3□□□□□ -0.44
CIITA-212ENST00000618207 OBSL1O75147 1896 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 TRAV19A0A0A6YYK7 116 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 EME2A4GXA9 379 aaPredicted RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 E7ENX8 843 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 FBP2O00757 339 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 DNAJA2O60884 412 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 TIMP1P01033 207 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 UBTFL6P0CB48 400 aaPredicted RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 HLA-FP30511 346 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 DIO3P55073 304 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 NTHL1P78549 312 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 RPS6KA2Q15349 733 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 REP15Q6BDI9 236 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CYP2R1Q6VVX0 501 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 FRA10AC1Q70Z53 315 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 LARP4Q71RC2 724 aaKnown RBP eCLIP12.29□□□□□ -0.44
CIITA-212ENST00000618207 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CDYL2Q8N8U2 506 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 GRIN3AQ8TCU5 1115 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 LKAAEAR1Q8TD35 194 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 ERLEC1Q96DZ1 483 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 FAR2Q96K12 515 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 HGH1Q9BTY7 390 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 ZDHHC6Q9H6R6 413 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 RMI1Q9H9A7 625 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CORO1CQ9ULV4 474 aaPredicted RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 PFDN6O15212 129 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 FZD6O60353 706 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 TSPAN12O95859 305 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 HMGCLP35914 325 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CASP2P42575 452 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 PIK3CGP48736 1102 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 STX1BP61266 288 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 VPS26BQ4G0F5 336 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CMTR2Q8IYT2 770 aaKnown RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 PGAM4Q8N0Y7 254 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 RHEBL1Q8TAI7 183 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 TCF12Q99081 682 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 TRMOQ9BU70 441 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CLPBQ9H078 707 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 ZBP1Q9H171 429 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 LINC00597Q9H2U6 94 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 SAGE1Q9NXZ1 904 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 STK39Q9UEW8 545 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CD84Q9UIB8 345 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CRLS1Q9UJA2 301 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 STOML2Q9UJZ1 356 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 HCFC2Q9Y5Z7 792 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 OAS3Q9Y6K5 1087 aaKnown RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 PRMT5O14744 637 aaPredicted RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 TPD52L2O43399 206 aaKnown RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 OR4F21O95013 312 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CTSAP10619 480 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CES1P23141 567 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 GDF5P43026 501 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 PSME3P61289 254 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 CDC16Q13042 620 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 SQLEQ14534 574 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 ZNF423Q2M1K9 1284 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 PIGGQ5H8A4 983 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 TMC8Q8IU68 726 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 ELMOD1Q8N336 334 aa12.29□□□□□ -0.44
CIITA-212ENST00000618207 NKAPQ8N5F7 415 aaKnown RBP12.29□□□□□ -0.44
CIITA-212ENST00000618207 GDPD5Q8WTR4 605 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms