RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 WDR26Q9H7D7 661 aa6.75□□□□□ -1.33
SCAMP1-206ENST00000618166 TRNAU1APQ9NX07 287 aaKnown RBP6.75□□□□□ -1.33
SCAMP1-206ENST00000618166 COX16Q9P0S2 106 aa6.75□□□□□ -1.33
SCAMP1-206ENST00000618166 KCNN3Q9UGI6 736 aa6.75□□□□□ -1.33
SCAMP1-206ENST00000618166 HS3ST4Q9Y661 456 aa6.75□□□□□ -1.33
SCAMP1-206ENST00000618166 CLDN11O75508 207 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 RECQL5O94762 991 aaPredicted RBP6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 TPOP07202 933 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 EBLN1P0CF75 366 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 CD19P15391 556 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 PPP1CAP62136 330 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 PDE1BQ01064 536 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 DMPKQ09013 629 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 AAMPQ13685 434 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 SETDB1Q15047 1291 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 PLEKHS1Q5SXH7 462 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 C1orf220Q5T0J3 134 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 DOK6Q6PKX4 331 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 IGFL2Q6UWQ7 119 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 GDPD4Q6W3E5 623 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 FAM92BQ6ZTR7 304 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 TECPR1Q7Z6L1 1165 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 PLXDC1Q8IUK5 500 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 ATP6V0D2Q8N8Y2 350 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 SIMC1Q8NDZ2 872 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 FBXO18Q8NFZ0 1043 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 OR1N1Q8NGS0 311 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 HMCESQ96FZ2 354 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 NLNQ9BYT8 704 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 FRMD8Q9BZ67 464 aaPredicted RBP6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 TM6SF1Q9BZW5 370 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 NIF3L1Q9GZT8 377 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 CLEC4MQ9H2X3 399 aaPredicted RBP6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 CYP3A43Q9HB55 503 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 PCDH12Q9NPG4 1184 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 WASH6PQ9NQA3 447 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 PANK4Q9NVE7 773 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 DMGDHQ9UI17 866 aaKnown RBP6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 RARRES3Q9UL19 164 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 PCYT1BQ9Y5K3 369 aaPredicted RBP6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 SLC30A1Q9Y6M5 507 aa6.74□□□□□ -1.33
SCAMP1-206ENST00000618166 FAM90A27PA6NNH2 459 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 O00370 1275 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 DDX3YO15523 660 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 SCRG1O75711 98 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 ZNF202O95125 648 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 PIGNO95427 931 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 TRUB2O95900 331 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 IGLV3-25P01717 112 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 RPN1P04843 607 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 HOXC4P09017 264 aaPredicted RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 RAB40ALP0C0E4 278 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 MYCLP1P12525 358 aaPredicted RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 NELFEP18615 380 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 RBMXP38159 391 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 ARCN1P48444 511 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 CASP6P55212 293 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 CDH4P55283 916 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 SRSF2Q01130 221 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 EIF4EBP2Q13542 120 aaPredicted RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 SNTB1Q13884 538 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 MYLK3Q32MK0 819 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 PDLIM3Q53GG5 364 aaPredicted RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 ZFYVE27Q5T4F4 411 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 CACHD1Q5VU97 1274 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 PODNL1Q6PEZ8 512 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 PAMR1Q6UXH9 720 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 CAMKMTQ7Z624 323 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 ZSWIM9Q86XI8 627 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 CDC20BQ86Y33 519 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 TAS1R2Q8TE23 839 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 KLHL6Q8WZ60 621 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 IRGQQ8WZA9 623 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 RSC1A1Q92681 617 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 FAM149B1Q96BN6 582 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 C7orf69Q9H7B7 122 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 SARS2Q9NP81 518 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 ANLNQ9NQW6 1124 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 CISHQ9NSE2 258 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 MPP6Q9NZW5 540 aa6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 TFIP11Q9UBB9 837 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-206ENST00000618166 IGHV5-51A0A0C4DH38 117 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 A0A0G2JK05 382 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 TRIM64A6NGJ6 449 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 TRIM64BA6NI03 449 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 FOXO6A8MYZ6 492 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 I6L893 689 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 SOCS6O14544 535 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 INSIG1O15503 277 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 LDB2O43679 373 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 EXOC3O60645 756 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 CALCAP01258 141 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 UNGP13051 313 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 UGT1A4P22310 534 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 MMP12P39900 470 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 CXCR3P49682 368 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 SOX8P57073 446 aa6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 NKX6-1P78426 367 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-206ENST00000618166 PMP22Q01453 160 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms