RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 DIAPH2O60879 1101 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 SPAG7O75391 227 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 MTX2O75431 263 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 NDUFS3O75489 264 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TOP3BO95985 862 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 KRT4P19013 534 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 ITGALP20701 1170 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 MAT2AP31153 395 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 FMO4P31512 558 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 SERPINB9P50453 376 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 SUOXP51687 545 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 RPS6KA3P51812 740 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 CSE1LP55060 971 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 MTAPQ13126 283 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 ZNF460Q14592 562 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 DBN1Q16643 649 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 HENMT1Q5T8I9 393 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 CWF19L1Q69YN2 538 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 KIAA0408Q6ZU52 694 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 ASRGL1Q7L266 308 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 SLC41A1Q8IVJ1 513 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TSTD1Q8NFU3 115 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 ZFR2Q9UPR6 939 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 SIT1Q9Y3P8 196 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3DA0A087WVF3 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3IA0A087WXS9 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3EA0A087X179 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3KA0A087X1G2 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 FAM95CA0A1B0GW59 222 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3FA6NER0 549 aaPredicted RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3LB9A6J9 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TSPAN6O43657 245 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 PI15O43692 258 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 RFPL1O75677 317 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 MT-ND3P03897 115 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3HP0C7X1 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 PYGBP11216 843 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 OGNP20774 298 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 PPM1JQ5JR12 505 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 ZNF648Q5T619 568 aaPredicted RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 LGSNQ5TDP6 509 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3GQ6DHY5 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3CQ6IPX1 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 ZNF549Q6P9A3 640 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TAOK1Q7L7X3 1001 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 LMNTD2Q8IXW0 634 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 LRRC34Q8IZ02 419 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TBC1D3Q8IZP1 549 aaPredicted RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 FRMD1Q8N878 549 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 FAM131CQ96AQ9 280 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 NUS1Q96E22 293 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 ELMO2Q96JJ3 720 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 RAB3IPQ96QF0 476 aaPredicted RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 TPSD1Q9BZJ3 242 aa16.13■□□□□ 0.17
SNAP47-213ENST00000617596 INTS9Q9NV88 658 aaKnown RBP16.13■□□□□ 0.17
SNAP47-213ENST00000617596 EME2A4GXA9 379 aaPredicted RBP16.12■□□□□ 0.17
SNAP47-213ENST00000617596 PSMD11O00231 422 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 INPP4BO15327 924 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 AP1G1O43747 822 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 ATG13O75143 517 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 PPP2CBP62714 309 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 PPP2CAP67775 309 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 ZBTB16Q05516 673 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 FGL2Q14314 439 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 CEP97Q8IW35 865 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 CLDN19Q8N6F1 224 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 GABPB2Q8TAK5 448 aaPredicted RBP16.12■□□□□ 0.17
SNAP47-213ENST00000617596 RLN3Q8WXF3 142 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 LPGAT1Q92604 370 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 C12orf65Q9H3J6 166 aaKnown RBP16.12■□□□□ 0.17
SNAP47-213ENST00000617596 CYP8B1Q9UNU6 501 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 NCKAP1Q9Y2A7 1128 aa16.12■□□□□ 0.17
SNAP47-213ENST00000617596 TRBV5-4A0A0C4DH59 114 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 A0A1W2PQU0 124 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 PHGDHO43175 533 aaKnown RBP16.11■□□□□ 0.17
SNAP47-213ENST00000617596 DNAJC6O75061 913 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 ATP5HO75947 161 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 TM7SF2O76062 418 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 PAK4O96013 591 aaPredicted RBP16.11■□□□□ 0.17
SNAP47-213ENST00000617596 LINGO3P0C6S8 592 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 ACRV1P26436 265 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 TTPAP49638 278 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 USP10Q14694 798 aaKnown RBP16.11■□□□□ 0.17
SNAP47-213ENST00000617596 ZNF284Q2VY69 593 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 NXPE1Q8N323 547 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 PLA2G15Q8NCC3 412 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 GDAP1Q8TB36 358 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 CLDN23Q96B33 292 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 NAF1Q96HR8 494 aaKnown RBP16.11■□□□□ 0.17
SNAP47-213ENST00000617596 GPR22Q99680 433 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 OLFM1Q99784 485 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 C19orf43Q9BQ61 176 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 SLC13A1Q9BZW2 595 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 CHRDQ9H2X0 955 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 SNX15Q9NRS6 342 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 PCMTD2Q9NV79 361 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 MBD1Q9UIS9 605 aaPredicted RBP16.11■□□□□ 0.17
SNAP47-213ENST00000617596 SCML1Q9UN30 329 aa16.11■□□□□ 0.17
SNAP47-213ENST00000617596 L3MBTL1Q9Y468 752 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms