RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CLPBQ9H078 707 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 AKTIPQ9H8T0 292 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 BATF3Q9NR55 127 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 NUDT4Q9NZJ9 180 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 PCTPQ9UKL6 214 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 PPIL1Q9Y3C6 166 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 NOTCH4Q99466 2003 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 PIKFYVEQ9Y2I7 2098 aa15.58■□□□□ 0.08
NR1H3-235ENST00000616973 ZBBXA8MT70 800 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 FGBP02675 491 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 CCR2P41597 374 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 HK3P52790 923 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 NFATC2Q13469 925 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 AGKQ53H12 422 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 GRAMD4Q6IC98 578 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 DHDDSQ86SQ9 333 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 PHYKPLQ8IUZ5 450 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 CMTM8Q8IZV2 173 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 SP7Q8TDD2 431 aaPredicted RBP15.57■□□□□ 0.08
NR1H3-235ENST00000616973 N4BP2L2Q92802 583 aaPredicted RBP15.57■□□□□ 0.08
NR1H3-235ENST00000616973 ECHDC3Q96DC8 303 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 NPAS2Q99743 824 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 TCF25Q9BQ70 676 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 CPEB1Q9BZB8 566 aaKnown RBP15.57■□□□□ 0.08
NR1H3-235ENST00000616973 TNKS2Q9H2K2 1166 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 ASB8Q9H765 288 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 IL26Q9NPH9 171 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 MRPL40Q9NQ50 206 aaKnown RBP15.57■□□□□ 0.08
NR1H3-235ENST00000616973 GNPTGQ9UJJ9 305 aa15.57■□□□□ 0.08
NR1H3-235ENST00000616973 PIP5K1BO14986 540 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 GRM6O15303 877 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 SNX2O60749 519 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 CLDN7O95471 211 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ESRRBO95718 433 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 BAG2O95816 211 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ALDOCP09972 364 aaKnown RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ARSAP15289 507 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 BPIP17213 487 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 GPX3P22352 226 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ME2P23368 584 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 HLA-FP30511 346 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 DPP6P42658 865 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 THOP1P52888 689 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 FOXA1P55317 472 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ERVFC1P60507 584 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 STX1BP61266 288 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 CEACAM7Q14002 265 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 LRP8Q14114 963 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 MYLK3Q32MK0 819 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 FAM151BQ6UXP7 276 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 MRPL43Q8N983 215 aaKnown RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ZNF557Q8N988 423 aaPredicted RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 PYDC1Q8WXC3 89 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 CEP44Q9C0F1 390 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 TUBB1Q9H4B7 451 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 GLYATL1P3A0A0U1RQE8 302 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ATP6AP2A0A1C7CYW4 349 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 AGAP14A8MT82 685 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 FBP2O00757 339 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 GPR39O43194 453 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ATP6AP2O75787 350 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 PTPN2P17706 415 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 LBPP18428 481 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ACRV1P26436 265 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 GKP32189 559 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 SPAM1P38567 509 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 MRPL19P49406 292 aaKnown RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 PPIGQ13427 754 aaKnown RBP eCLIP15.56■□□□□ 0.086e-8■■□□□ 11.9
NR1H3-235ENST00000616973 TGFBIQ15582 683 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 GEN1Q17RS7 908 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 REP15Q6BDI9 236 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 PTRHD1Q6GMV3 140 aaKnown RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 OGFOD2Q6N063 350 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 C22orf39Q6P5X5 142 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ADAMTSL2Q86TH1 951 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ZSWIM9Q86XI8 627 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 OR56A4Q8NGH8 313 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 ZNF184Q99676 751 aaPredicted RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 SMG9Q9H0W8 520 aaKnown RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 SEMA4BQ9NPR2 832 aaPredicted RBP15.56■□□□□ 0.08
NR1H3-235ENST00000616973 PFDN4Q9NQP4 134 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 CACNA2D2Q9NY47 1150 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 CD274Q9NZQ7 290 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 CCDC167Q9P0B6 97 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 LRCH1Q9Y2L9 728 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 PCDHGA7Q9Y5G6 932 aa15.56■□□□□ 0.08
NR1H3-235ENST00000616973 IQCF5A8MTL0 148 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 BBIP1A8MTZ0 92 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 LIN7AO14910 233 aaPredicted RBP15.55■□□□□ 0.08
NR1H3-235ENST00000616973 UROSP10746 265 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 CTSOP43234 321 aaPredicted RBP15.55■□□□□ 0.08
NR1H3-235ENST00000616973 ERFP50548 548 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 PSME3P61289 254 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 FUT11Q495W5 492 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 RNF111Q6ZNA4 994 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 TPRG1Q6ZUI0 275 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 PCDH20Q8N6Y1 951 aaKnown RBP15.55■□□□□ 0.08
NR1H3-235ENST00000616973 SCRN2Q96FV2 425 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 HTATIP2Q9BUP3 242 aa15.55■□□□□ 0.08
NR1H3-235ENST00000616973 FBRSL1Q9HCM7 1045 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms