RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SNNO75324 88 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 UROSP10746 265 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 UQCRBP14927 111 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 DDX5P17844 614 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 IL23RQ5VWK5 629 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 ARHGAP12Q8IWW6 846 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 ACDQ96AP0 544 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 HIC2Q96JB3 615 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 PAPOLBQ9NRJ5 636 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 KCTD5Q9NXV2 234 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 GALPQ9UBC7 116 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 ECI2O75521 394 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 LRATO95237 230 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 IRX1P78414 480 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 SERPINA13PQ6UXR4 307 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 SPPL2CQ8IUH8 684 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 TMEM132CQ8N3T6 1108 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 CLDN19Q8N6F1 224 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 NT5C3BQ969T7 300 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 PSKH2Q96QS6 385 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 NR1H4Q96RI1 486 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 CCDC106Q9BWC9 280 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 UGT2B28Q9BY64 529 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 ELAC1Q9H777 363 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 hCG_2014768A0A024R1R8 64 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 SYNDIG1LA6NDD5 238 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 SLC28A1O00337 649 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 KPNA5O15131 536 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 XRCC1P18887 633 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ITPKAP23677 461 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 TM4SF4P48230 202 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 RPIAP49247 311 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 NRG1Q02297 640 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 OCA2Q04671 838 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 BNIP2Q12982 314 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ADRM1Q16186 407 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 TCF25Q9BQ70 676 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 MYRFQ9Y2G1 1151 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 IQCF5A8MTL0 148 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 LEPRP48357 1165 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 POLR2JP52435 117 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 SULT2A1Q06520 285 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 MYO9BQ13459 2157 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 MTX3Q5HYI7 312 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 TBC1D19Q8N5T2 526 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 TSSK3Q96PN8 268 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 CIB1Q99828 191 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 GRIP2Q9C0E4 1043 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 AKTIPQ9H8T0 292 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 THG1LQ9NWX6 298 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 EURLQ9NYK6 297 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 NUDT4Q9NZJ9 180 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZNF490Q9ULM2 529 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 IFRD1O00458 451 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 AURKAO14965 403 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 NTRK1P04629 796 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 CCL5P13501 91 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 COX7A2P14406 83 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 RAET1GQ6H3X3 334 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 CHST9Q7L1S5 443 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 NECAB2Q7Z6G3 386 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 RALGPS2Q86X27 583 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 OR9I1Q8NGQ6 314 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 SH3RF2Q8TEC5 729 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ING5Q8WYH8 240 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 CDK15Q96Q40 435 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ATG10Q9H0Y0 220 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZNF556Q9HAH1 456 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
PPP4R3B-206ENST00000616407 POP4O95707 220 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 ITGBL1O95965 494 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 FGBP02675 491 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 FTH1P02794 183 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 SOD2P04179 222 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 ELFN1P0C7U0 828 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 NELFEP18615 380 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 GLDCP23378 1020 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 GPR1P46091 355 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 GTF2H2Q13888 395 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 XKR6Q5GH73 641 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 GTF2H2CQ6P1K8 395 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZDHHC13Q8IUH4 622 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 OR52E6Q96RD3 313 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 GEMIN8Q9NWZ8 242 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 DNAJB1P25685 340 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 CHI3L1P36222 383 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 GNPDA1P46926 289 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 ADAM17P78536 824 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 CDC16Q13042 620 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms