RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	MGME1	Q9BQP7	344 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SYTL2	Q9HCH5	934 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CD274	Q9NZQ7	290 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	POLG2	Q9UHN1	485 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MED16	Q9Y2X0	877 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ASB1	Q9Y576	335 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390		V9GYQ6	96 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ZFC3H1	O60293	1989 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390		A0A1B0GTW7	788 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TRIM24	O15164	1050 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	STAMBP	O95630	424 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ZNF140	P52738	457 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	C18orf21	Q32NC0	220 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	DHFR2	Q86XF0	187 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CPNE9	Q8IYJ1	553 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ADCY4	Q8NFM4	1077 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CANT1	Q8WVQ1	401 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SPATA17	Q96L03	361 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SPATA16	Q9BXB7	569 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TM6SF2	Q9BZW4	377 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GRIP2	Q9C0E4	1043 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MAP10	Q9P2G4	905 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	FCF1	Q9Y324	198 aa	Known RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SCN5A	Q14524	2016 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	STX7	O15400	261 aa	Known RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SEC24A	O95486	1093 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	C1R	P00736	705 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	EPO	P01588	193 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CDH4	P55283	916 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SEMG2	Q02383	582 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GALNT1	Q10472	559 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GPNMB	Q14956	572 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PLA2G4E	Q3MJ16	856 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	HECTD3	Q5T447	861 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ANKS6	Q68DC2	871 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ANKS3	Q6ZW76	656 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GALNT7	Q86SF2	657 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	APLF	Q8IW19	511 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PCYOX1L	Q8NBM8	494 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GPR150	Q8NGU9	434 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	NUDT8	Q8WV74	236 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SLCO4A1	Q96BD0	722 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TEX37	Q96LM6	180 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SLC29A1	Q99808	456 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SUCO	Q9UBS9	1254 aa	Known RBP	13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PCDHB9	Q9Y5E1	797 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CHD5	Q8TDI0	1954 aa		13.78	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ZNF840P	A6NDX5	716 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ANKRD66	B4E2M5	251 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390		H0Y626	953 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	KDELR3	O43731	214 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SNX2	O60749	519 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	STC2	O76061	302 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PRAMEF12	O95522	483 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ALPI	P09923	528 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	OGN	P20774	298 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	LPO	P22079	712 aa	Predicted RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MZF1	P28698	734 aa	Predicted RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SLC26A3	P40879	764 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RHD	Q02161	417 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SAMD4B	Q5PRF9	694 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	C6orf10	Q5SRN2	563 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SPOUT1	Q5T280	376 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	AFTPH	Q6ULP2	937 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	KIAA1191	Q96A73	305 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	FUBP1	Q96AE4	644 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	LINGO1	Q96FE5	620 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	HGH1	Q9BTY7	390 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TDRD1	Q9BXT4	1180 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	FAM192A	Q9GZU8	254 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TFB2M	Q9H5Q4	396 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	EIF2B4	Q9UI10	523 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TRMT6	Q9UJA5	497 aa	Known RBP	13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	NDUFAF1	Q9Y375	327 aa		13.77	□□□□□ -0.2
CACNA1C-231	ENST00000616390	C7orf72	A4D263	438 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	SAC3D1	A6NKF1	404 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390		H3BNC9	293 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390		H7C4K7	107 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	NME4	O00746	187 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	LSM1	O15116	133 aa	Known RBP	13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	PQBP1	O60828	265 aa	Known RBP	13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	KERA	O60938	352 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	KATNA1	O75449	491 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CLPTM1	O96005	669 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ZDHHC11B	P0C7U3	371 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	LBP	P18428	481 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ATP6V1B2	P21281	511 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ALDH7A1	P49419	539 aa	Known RBP	13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	KPNA1	P52294	538 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ATN1	P54259	1190 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	SH3BGR	P55822	239 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	MYBPC1	Q00872	1141 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	ARHGEF6	Q15052	776 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TAF1A	Q15573	450 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	CDYL2	Q8N8U2	506 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	BIRC8	Q96P09	236 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	TMEM181	Q9P2C4	612 aa		13.77	□□□□□ -0.21
CACNA1C-231	ENST00000616390	SRRD	Q9UH36	339 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms