RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 RAB43Q86YS6 212 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 LACC1Q8IV20 430 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 HID1Q8IV36 788 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 SIMC1Q8NDZ2 872 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 TP53INP1Q96A56 240 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 EGLN2Q96KS0 407 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 MAP10Q9P2G4 905 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ARHGAP28Q9P2N2 729 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 LOC110117498-PIK3R3F6TDL0 507 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 CST1P01037 141 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 DNTTP04053 509 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 CAPN3P20807 821 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 AZGP1P25311 298 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 APLP1P51693 650 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF280AP59817 542 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 SNRPD2P62316 118 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 SUZ12Q15022 739 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 TAB1Q15750 504 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 CTU2Q2VPK5 515 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 PYCR3Q53H96 274 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 NXNL2Q5VZ03 156 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ANKRD34AQ69YU3 496 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF517Q6ZMY9 492 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 KDELC2Q7Z4H8 507 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 UBE2Q1Q7Z7E8 422 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 PELI3Q8N2H9 469 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 DYNC2LI1Q8TCX1 351 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 NTPCRQ9BSD7 190 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 HAPLN2Q9GZV7 340 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZBTB20Q9HC78 741 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 ERVK13-1Q9NX77 482 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 POLHQ9Y253 713 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 KLHL20Q9Y2M5 609 aa10.31□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM95CA0A1B0GW59 222 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 OR6C70A6NIJ9 312 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 OGTO15294 1046 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 PIGAP37287 484 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 KPNA2P52292 529 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF470Q6ECI4 717 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 AMIGO1Q86WK6 493 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FUNDC1Q8IVP5 155 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 PYROXD2Q8N2H3 581 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 GTF2H4Q92759 462 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 QKIQ96PU8 341 aaKnown RBP eCLIP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF670Q9BS34 389 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 RIBC2Q9H4K1 309 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 PXMP2Q9NR77 195 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 HMGXB4Q9UGU5 601 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 SARDHQ9UL12 918 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 GINS2Q9Y248 185 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TPRKBQ9Y3C4 175 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 AGAP5A6NIR3 686 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 H3BUI4 141 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FZD9O00144 591 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 DFFAO00273 331 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 POLR1CO15160 346 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 AIREO43918 545 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM20BO75063 409 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 ENDOD1O94919 500 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 PRLP01236 227 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 RBP1P09455 135 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 SBK3P0C264 359 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 SLC35E2BP0CK96 405 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 ZNF37AP17032 561 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 CDH5P33151 784 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 POLD2P49005 469 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 NOL9Q5SY16 702 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM205BPQ63HN1 556 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TRNP1Q6NT89 227 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM131BQ86XD5 332 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 DENND6AQ8IWF6 608 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TRIM48Q8IWZ4 208 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 UBE2J2Q8N2K1 259 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 HEXDCQ8WVB3 486 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TWNKQ96RR1 684 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 FAM49AQ9H0Q0 323 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 LHX5Q9H2C1 402 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 SMOC2Q9H3U7 446 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 NARFLQ9H6Q4 476 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 AKTIPQ9H8T0 292 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TNFRSF12AQ9NP84 129 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 USE1Q9NZ43 259 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 BTRCQ9Y297 605 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 LYPLA2O95372 231 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 HSD17B1P14061 328 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 HGFP14210 728 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 NMBRP28336 390 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 SFNP31947 248 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 ETV3P41162 512 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 HTR3AP46098 478 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 RAB10P61026 200 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 PRKCEQ02156 737 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 CLCA4Q14CN2 919 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 STK11Q15831 433 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 BCL7AQ4VC05 210 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TXNDC11Q6PKC3 985 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 TMEM130Q8N3G9 435 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 C7orf31Q8N865 590 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 MTMR14Q8NCE2 650 aa10.3□□□□□ -0.76
TNFAIP3-208ENST00000615468 IL17RDQ8NFM7 739 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms