RNA–Protein interactions for RNA: ENST00000613936.4

AC004852.2-202, humanhuman

TSL 1 (best)

Gene AC004852.2, Length 875 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004852.2-202ENST00000613936 PDE1CQ14123 709 aaPredicted RBP3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 KIR2DS3Q14952 304 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 PRICKLE4Q2TBC4 344 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 ZFP69Q49AA0 526 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 ASPRV1Q53RT3 343 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 CXorf66Q5JRM2 361 aaPredicted RBP3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 CYP26C1Q6V0L0 522 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 ANO5Q75V66 913 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 MAPK1IP1LQ8NDC0 245 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 RBM15BQ8NDT2 890 aaKnown RBP3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 RDM1Q8NG50 284 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 OR1J2Q8NGS2 313 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 PSPC1Q8WXF1 523 aaKnown RBP3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 TMEM190Q8WZ59 177 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 PPP1R13BQ96KQ4 1090 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 TMEM68Q96MH6 324 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 SMC6Q96SB8 1091 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 SIL1Q9H173 461 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 RANBP17Q9H2T7 1088 aaKnown RBP3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 RAD21L1Q9H4I0 556 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 PDZD7Q9H5P4 517 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 LTB4R2Q9NPC1 389 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 ADPRHL2Q9NX46 363 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 OR14J1Q9UGF5 321 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 GJD2Q9UKL4 321 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 SMAD5-AS1Q9Y6J3 95 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 CAPN7Q9Y6W3 813 aa3.17□□□□□ -1.9
AC004852.2-202ENST00000613936 COL2A1P02458 1487 aaPredicted RBP3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 FAM237AA0A1B0GTK4 181 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 A0A1W2PP11 408 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 DUXAA6NLW8 204 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 IFRD1O00458 451 aaPredicted RBP3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 NR5A2O00482 541 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 KRT19P08727 400 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 ZNF10P21506 573 aaPredicted RBP3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 UGT1A1P22309 533 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 ELF1P32519 619 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 LUMP51884 338 aaPredicted RBP3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 RARSP54136 660 aaKnown RBP3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 CDC16Q13042 620 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 BIRC3Q13489 604 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 OLIG2Q13516 323 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 ITGA9Q13797 1035 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 LPAL2Q16609 132 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 CDONQ4KMG0 1287 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 CDC73Q6P1J9 531 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 PACS1Q6VY07 963 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 SH2D5Q6ZV89 423 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 GTSCR1Q86UQ5 136 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 ZNF473Q8WTR7 871 aaKnown RBP3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 HTRA1Q92743 480 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 PSD2Q9BQI7 771 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 ABI3Q9P2A4 366 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 ACAD8Q9UKU7 415 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 ARHGAP26Q9UNA1 814 aa3.16□□□□□ -1.9
AC004852.2-202ENST00000613936 C1orf226A1L170 272 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 HOXC11O43248 304 aaPredicted RBP3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 ARHGEF9O43307 516 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 CRLF1O75462 422 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 TSHBP01222 138 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 CD48P09326 243 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 MSH3P20585 1137 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 MAPK9P45984 424 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 HARS2P49590 506 aaKnown RBP3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 F2RL1P55085 397 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 SPOCK1Q08629 439 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 PNLIPRP3Q17RR3 467 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 PM20D2Q8IYS1 436 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 TRIM58Q8NG06 486 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 ST8SIA4Q92187 359 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 SMARCE1Q969G3 411 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 ZNF653Q96CK0 615 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 ZNF689Q96CS4 500 aaPredicted RBP3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 NR1H4Q96RI1 486 aaPredicted RBP3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 PIGMQ9H3S5 423 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 ZBTB20Q9HC78 741 aaPredicted RBP3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 SLC38A7Q9NVC3 462 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 GGA3Q9NZ52 723 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 KLHL9Q9P2J3 617 aa3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 MRPS28Q9Y2Q9 187 aaKnown RBP3.15□□□□□ -1.91
AC004852.2-202ENST00000613936 A0A0G2JNG1 304 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 KANSL1LA0AUZ9 987 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 A6NL46 340 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 H0YIN7 160 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 SYNCRIPO60506 623 aaKnown RBP3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 KCNK5O95279 499 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 MLYCDO95822 493 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 XBP1P17861 261 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 FRG1Q14331 258 aaKnown RBP3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 KIR2DS5Q14953 304 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 DPCR1Q3MIW9 517 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 ZNF805Q5CZA5 627 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 SLC9C2Q5TAH2 1124 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 PLXDC2Q6UX71 529 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 CNTROBQ8N137 903 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 LYG1Q8N1E2 194 aa3.14□□□□□ -1.91
AC004852.2-202ENST00000613936 GBGT1Q8N5D6 347 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms