RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 GLYATL1P3A0A0U1RQE8 302 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 NTN3O00634 580 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 STX7O15400 261 aaKnown RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 B4GAT1O43505 415 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 LDB2O43679 373 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 TLX3O43711 291 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 PYGLP06737 847 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 RPL22P35268 128 aaKnown RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 RPIAP49247 311 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF140P52738 457 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 XIAPP98170 497 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 PEX6Q13608 980 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 SEPT6Q14141 434 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 POU6F1Q14863 301 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 TAF1AQ15573 450 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 TRIP13Q15645 432 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 SEPT7Q16181 437 aaKnown RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 AMZ1Q400G9 498 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 DET1Q7L5Y6 550 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 C17orf82Q86X59 251 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 PHYKPLQ8IUZ5 450 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 RAVER1Q8IY67 606 aaKnown RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 BEND7Q8N7W2 519 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 PRELID2Q8N945 189 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 RASGEF1AQ8N9B8 481 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 TRIM58Q8NG06 486 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 GDAP1Q8TB36 358 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 SLC37A2Q8TED4 501 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 COG1Q8WTW3 980 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 NAT6Q93015 286 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 PLEKHG4BQ96PX9 1271 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 CDH19Q9H159 772 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 CCDC86Q9H6F5 360 aaKnown RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 TRIM39Q9HCM9 518 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 KLC4Q9NSK0 619 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 HACD3Q9P035 362 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 RALYQ9UKM9 306 aaKnown RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 AAR2Q9Y312 384 aaKnown RBP12.51□□□□□ -0.41
CSTF1-208ENST00000613138 ENTPD2Q9Y5L3 495 aa12.51□□□□□ -0.41
CSTF1-208ENST00000613138 OR51F1A6NGY5 319 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 SRRM3A6NNA2 597 aaPredicted RBP12.5□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF185O15231 689 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 BRINP1O60477 761 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 AP2A1O95782 977 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 HGFP14210 728 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 LPOP22079 712 aaPredicted RBP12.5□□□□□ -0.41
CSTF1-208ENST00000613138 ALDH4A1P30038 563 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 PBLDP30039 288 aaPredicted RBP12.5□□□□□ -0.41
CSTF1-208ENST00000613138 ARSDP51689 593 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 B4GALNT1Q00973 533 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 CFHR1Q03591 330 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 LONRF2Q1L5Z9 754 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 ISXQ2M1V0 245 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 P3H1Q32P28 736 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 C3orf38Q5JPI3 329 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 TTC27Q6P3X3 843 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 FOXR1Q6PIV2 292 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 FAM83HQ6ZRV2 1179 aaPredicted RBP12.5□□□□□ -0.41
CSTF1-208ENST00000613138 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 SPRED1Q7Z699 444 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 C11orf96Q7Z7L8 435 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 NUDT22Q9BRQ3 303 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 AP1M1Q9BXS5 423 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 LRRN3Q9H3W5 708 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 OSGEPL1Q9H4B0 414 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 TRABDQ9H4I3 376 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 RDH14Q9HBH5 336 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 TMEM9Q9P0T7 183 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 PKP3Q9Y446 797 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
CSTF1-208ENST00000613138 ADAMTS20P59510 1910 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 TCRBV7S3A2A0A539 114 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 A6NCN8 305 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 OR2AG2A6NM03 316 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 D6RAR5 112 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 CHUKO15111 745 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 NRDCO43847 1150 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 CDK14O94921 469 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 PRAMEF1O95521 474 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 GLB1P16278 677 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF7P17097 686 aaPredicted RBP12.49□□□□□ -0.41
CSTF1-208ENST00000613138 MPSTP25325 297 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 RPL10P27635 214 aaKnown RBP12.49□□□□□ -0.41
CSTF1-208ENST00000613138 DRG2P55039 364 aaKnown RBP12.49□□□□□ -0.41
CSTF1-208ENST00000613138 TMEM115Q12893 351 aaPredicted RBP12.49□□□□□ -0.41
CSTF1-208ENST00000613138 NFATC2Q13469 925 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 SPIDRQ14159 915 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 CCNG2Q16589 344 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 XKR5Q6UX68 686 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 RBM44Q6ZP01 1051 aaKnown RBP12.49□□□□□ -0.41
CSTF1-208ENST00000613138 PROSER1Q86XN7 944 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 TRAPPC5Q8IUR0 188 aa12.49□□□□□ -0.41
CSTF1-208ENST00000613138 C17orf53Q8N3J3 647 aaPredicted RBP12.49□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF398Q8TD17 642 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms