RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 PIM3Q86V86 326 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 TANKQ92844 425 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 RMDN1Q96DB5 314 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 MUC3BQ9H195 1237 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ZDHHC2Q9UIJ5 367 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ACOT8O14734 319 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 SLC7A4O43246 635 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 PAPSS2O95340 614 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 GOT2P00505 430 aaKnown RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 PLK1P53350 603 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 CDKN2DP55273 166 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 RGS21Q2M5E4 152 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 RNF219Q5W0B1 726 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 DNAJB7Q7Z6W7 309 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 TMEM126BQ8IUX1 230 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 HERC6Q8IVU3 1022 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 SCAIQ8N9R8 606 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 RDH11Q8TC12 318 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ANKRD49Q8WVL7 239 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 DLG3Q92796 817 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 FEM1CQ96JP0 617 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF558Q96NG5 402 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 DRC3Q9H069 523 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 MRPL46Q9H2W6 279 aaKnown RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 FAM96AQ9H5X1 160 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 SEPT3Q9UH03 358 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 SLC8A2Q9UPR5 921 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 CLDN11O75508 207 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 BMP10O95393 424 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 YAP1P46937 504 aaKnown RBP16.37■□□□□ 0.21
CNOT3-208ENST00000613073 ADGRF1Q5T601 910 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 GALNT18Q6P9A2 607 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 RPS27LQ71UM5 84 aaKnown RBP16.37■□□□□ 0.21
CNOT3-208ENST00000613073 PGAM4Q8N0Y7 254 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 SNX31Q8N9S9 440 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 TXNDC5Q8NBS9 432 aaKnown RBP16.37■□□□□ 0.21
CNOT3-208ENST00000613073 TOP1MTQ969P6 601 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 TAMM41Q96BW9 452 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 PLD4Q96BZ4 506 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 MFSD1Q9H3U5 465 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 POLR1BQ9H9Y6 1135 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 IGSF5Q9NSI5 407 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 A0A087WXM4 84 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 CCDC162PA2VCL2 907 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 CFAP99D6REC4 459 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 SOCS2O14508 198 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 KDM1AO60341 852 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 TPST1O60507 370 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 S1PR4O95977 384 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 FGF1P05230 155 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 JUNP05412 331 aaKnown RBP16.37■□□□□ 0.21
CNOT3-208ENST00000613073 MBL2P11226 248 aaPredicted RBP16.37■□□□□ 0.21
CNOT3-208ENST00000613073 HLA-DPA1P20036 260 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 POLD2P49005 469 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 TUBA4AP68366 448 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 TRIM16LQ309B1 348 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 PERM1Q5SV97 790 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 NIPAL1Q6NVV3 410 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 SNX29P2Q8IUI4 249 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 ZC3H7AQ8IWR0 971 aaKnown RBP16.37■□□□□ 0.21
CNOT3-208ENST00000613073 OVCA2Q8WZ82 227 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 MGME1Q9BQP7 344 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 GID8Q9NWU2 228 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 VWA7Q9Y334 891 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 PCDHGC4Q9Y5F7 938 aa16.37■□□□□ 0.21
CNOT3-208ENST00000613073 A0A087X1B8 175 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 A0A0U1RQS6 177 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 KDELR3O43731 214 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 SNAP91O60641 907 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 CNOT3O75175 753 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 H2AFYO75367 372 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 KCNH1O95259 989 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 KCNA5P22460 613 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 CLCN5P51795 746 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 SEMA3AQ14563 771 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 VEPH1Q14D04 833 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 PTPRRQ15256 657 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 LAYNQ6UX15 382 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 OFCC1Q8IZS5 231 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 SLC39A11Q8N1S5 342 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 CHPT1Q8WUD6 406 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 MYRFLQ96LU7 910 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF599Q96NL3 588 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 PSKH2Q96QS6 385 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 KLF16Q9BXK1 252 aaPredicted RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 POMKQ9H5K3 350 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 GMPR2Q9P2T1 348 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 TBX21Q9UL17 535 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 FNDC3AQ9Y2H6 1198 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 RAP2CQ9Y3L5 183 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 SPO11Q9Y5K1 396 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 CHD5Q8TDI0 1954 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 KRBA1A5PL33 1030 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 FAM149AA5PLN7 773 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 TMEM233B4DJY2 109 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 PARNO95453 639 aaKnown RBP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 GLP2RO95838 553 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 C1RP00736 705 aa16.36■□□□□ 0.21
CNOT3-208ENST00000613073 HNRNPLP14866 589 aaKnown RBP eCLIP16.36■□□□□ 0.21
CNOT3-208ENST00000613073 TFEBP19484 476 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms