RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 USP17L10C9JJH3 530 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ATP6V1G2-DDX39BF2Z307 99 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 HCN1O60741 890 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 DNTTP04053 509 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PTPN1P18031 435 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 RPS3P23396 243 aaKnown RBP eCLIP8.72□□□□□ -1.01
TTC28-208ENST00000612946 BNIP3Q12983 259 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 DPP9Q86TI2 863 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 FUOMA2VDF0 154 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 INMTO95050 263 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ACOX1Q15067 660 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 TGFBIQ15582 683 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 HES5Q5TA89 166 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SLC30A10Q6XR72 485 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 FEM1CQ96JP0 617 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 OR52E6Q96RD3 313 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 TM9SF2Q99805 663 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SNX15Q9NRS6 342 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 MAT2BQ9NZL9 334 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 TNFRSF10AO00220 468 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 SLC11A2P49281 568 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 RELAQ04206 551 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 HACD4Q5VWC8 232 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 REP15Q6BDI9 236 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 OOSP2Q86WS3 158 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PSTKQ8IV42 348 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 USP7Q93009 1102 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ZNF304Q9HCX3 659 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 OIP5O43482 229 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 RPS17P08708 135 aaKnown RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 GSTM3P21266 225 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ZNF143P52747 638 aaPredicted RBP8.72□□□□□ -1.01
TTC28-208ENST00000612946 GNASQ5JWF2 1037 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 PRAMEF17Q5VTA0 474 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 OR10T2Q8NGX3 314 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 ART5Q96L15 291 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 C8orf48Q96LL4 319 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 GLT1D1Q96MS3 346 aa8.72□□□□□ -1.01
TTC28-208ENST00000612946 GAKO14976 1311 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 K7EPI3 171 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 PPEF1O14829 653 aaPredicted RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 B3GALNT1O75752 331 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 UROSP10746 265 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 CHMP24386 653 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 RPL9P32969 192 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 GMPRP36959 345 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 NDST1P52848 882 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 PTPN11Q06124 597 aaPredicted RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 SEMA3AQ14563 771 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 UBXN11Q5T124 520 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 PNCKQ6P2M8 343 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 C16orf86Q6ZW13 317 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 ADCK2Q7Z695 626 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 SDR16C5Q8N3Y7 309 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 SERAC1Q96JX3 654 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 GAL3ST1Q99999 423 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 BLOC1S4Q9NUP1 217 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 TAF6LQ9Y6J9 622 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 PPM1BO75688 479 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 SNAPINO95295 136 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 IFNW1P05000 195 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 GSTM2P28161 218 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 EPHA3P29320 983 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 MAGEA6P43360 314 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 CDKL1Q00532 357 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 ZCCHC23Q6ZST2 131 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 TSPEARQ8WU66 669 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 SMG7Q92540 1137 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 ZNF471Q9BX82 626 aaPredicted RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 COQ10BQ9H8M1 238 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 LRRC4CQ9HCJ2 640 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 DPP3Q9NY33 737 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 POLR1DQ9Y2S0 133 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 PCDHGB2Q9Y5G2 931 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 RAD17O75943 681 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 CCNB2O95067 398 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 TFEBP19484 476 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 AZGP1P25311 298 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 ZNF81P51508 661 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 TSPAN5P62079 268 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 GALNT7Q86SF2 657 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 CAMK1GQ96NX5 476 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 MTMR4Q9NYA4 1195 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 CNOT6Q9ULM6 557 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 SDK1Q7Z5N4 2213 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 DNAJB6O75190 326 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 RASAL1O95294 804 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 MTHFD1P11586 935 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 XRCC1P18887 633 aaPredicted RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 CYP3A5P20815 502 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 DNAJA1P31689 397 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 RPP38P78345 283 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 PCBP1Q15365 356 aaKnown RBP eCLIP8.71□□□□□ -1.01
TTC28-208ENST00000612946 USP49Q70CQ1 688 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 C11orf65Q8NCR3 313 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 SPATA20Q8TB22 786 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 UCKL1Q9NWZ5 548 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 TMEM260Q9NX78 707 aa8.71□□□□□ -1.01
TTC28-208ENST00000612946 NUFIP1Q9UHK0 495 aaKnown RBP8.71□□□□□ -1.01
TTC28-208ENST00000612946 TLR6Q9Y2C9 796 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms