RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 HLA-DPA1P20036 260 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 LHCGRP22888 699 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 PSMB4P28070 264 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 RABIFP47224 123 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 SCTRP47872 440 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 CLDN2P57739 230 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 NXPH1P58417 271 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 YPEL5P62699 121 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 BNC1Q01954 994 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 GALNT3Q14435 633 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 ACOX1Q15067 660 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 HLA-BQ31612 363 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 LRRC66Q68CR7 880 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 LAYNQ6UX15 382 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 TRPM8Q7Z2W7 1104 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 SLC26A11Q86WA9 606 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 KLHDC8BQ8IXV7 354 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 CNPY4Q8N129 248 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 OXR1Q8N573 874 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 MINDY1Q8N5J2 469 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 TP53I13Q8NBR0 393 aaPredicted RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 IPMKQ8NFU5 416 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 BMFQ96LC9 184 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 COQ10AQ96MF6 247 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 EBNA1BP2Q99848 306 aaKnown RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 GTPBP2Q9BX10 602 aaKnown RBP8.79□□□□□ -1
SMAD4-217ENST00000611848 FSD1LQ9BXM9 530 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 ERVMER34-1Q9H9K5 563 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 MAGEE1Q9HCI5 957 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 FSCN3Q9NQT6 498 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 CA5BQ9Y2D0 317 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 ARL2BPQ9Y2Y0 163 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 SNX11Q9Y5W9 270 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 CAPN7Q9Y6W3 813 aa8.79□□□□□ -1
SMAD4-217ENST00000611848 C1orf232A0A0U1RR37 186 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 RGSL1A5PLK6 1076 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 POM121BA6NF01 834 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 FAM159BA6NKW6 160 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 C4orf47A7E2U8 309 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 H0Y8X5 98 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 PSMD3O43242 534 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 PIAS1O75925 651 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 DNAJC8O75937 253 aaPredicted RBP8.78□□□□□ -1
SMAD4-217ENST00000611848 CLDN7O95471 211 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 MT-ND3P03897 115 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 FGF1P05230 155 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 INHBAP08476 426 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 DHRS4L1P0CG22 281 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 ZNF883P0CG24 379 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 IGFALSP35858 605 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 PFN3P60673 137 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 SARNPP82979 210 aaKnown RBP8.78□□□□□ -1
SMAD4-217ENST00000611848 PTSQ03393 145 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 PTK2BQ14289 1009 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 CDKN3Q16667 212 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 ZNF423Q2M1K9 1284 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 WSCD2Q2TBF2 565 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 GALNTL6Q49A17 601 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 STPG1Q5TH74 334 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 HHATQ5VTY9 493 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 STEAP4Q687X5 459 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 LRRC8BQ6P9F7 803 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 UNC5AQ6ZN44 842 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 Q6ZSR6 202 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 KDELC2Q7Z4H8 507 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 PTAR1Q7Z6K3 402 aaPredicted RBP8.78□□□□□ -1
SMAD4-217ENST00000611848 TECPR1Q7Z6L1 1165 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 TSPAN33Q86UF1 283 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 NLRP8Q86W28 1048 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 LRRC6Q86X45 466 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 OR13H1Q8NG92 308 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 NUS1Q96E22 293 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 DTD2Q96FN9 168 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 CFAP36Q96G28 342 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 GORASP1Q9BQQ3 440 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 PITPNM3Q9BZ71 974 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 VPS11Q9H270 941 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 GAREM1Q9H706 876 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 ZFYVE1Q9HBF4 777 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 GPR27Q9NS67 375 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 DNAAF2Q9NVR5 837 aaKnown RBP8.78□□□□□ -1
SMAD4-217ENST00000611848 SLC12A4Q9UP95 1085 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 IKBKGQ9Y6K9 419 aa8.78□□□□□ -1
SMAD4-217ENST00000611848 F5H423 210 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 SLC30A4O14863 429 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 YKT6O15498 198 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 EDF1O60869 148 aaKnown RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 PYGLP06737 847 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ATXN1LP0C7T5 689 aaKnown RBP8.77□□□□□ -1.01
SMAD4-217ENST00000611848 GM2AP17900 193 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 TEAD1P28347 426 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ADRA1AP35348 466 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ETV3P41162 512 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 ETV4P43268 484 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 RXRGP48443 463 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 STC1P52823 247 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 DPTQ07507 201 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 SLC14A1Q13336 389 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 PTPRRQ15256 657 aa8.77□□□□□ -1.01
SMAD4-217ENST00000611848 IRF4Q15306 451 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms