RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 GPR180Q86V85 440 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 KBTBD6Q86V97 674 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 NRROSQ86YC3 692 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 LINC00346Q8IVM7 164 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 ADHFE1Q8IWW8 467 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 MCEMP1Q8IX19 187 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 OR8H2Q8N162 312 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 GSDMBQ8TAX9 411 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 PRPF31Q8WWY3 499 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 DNAAF4Q8WXU2 420 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 TANKQ92844 425 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 THOC3Q96J01 351 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 PKNOX2Q96KN3 472 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 PAFAH2Q99487 392 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 SEMA3CQ99985 751 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 SLF1Q9BQI6 1058 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 ZPBPQ9BS86 351 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 VPS33BQ9H267 617 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 DNAJC18Q9H819 358 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 SMARCAL1Q9NZC9 954 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 SIX4Q9UIU6 781 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 FBXL2Q9UKC9 423 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 PADI3Q9ULW8 664 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 KLHL20Q9Y2M5 609 aa4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-213ENST00000609587 LACTBL1A8MY62 500 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 FAM90A26D6RGX4 464 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 ANKRD28O15084 1053 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 MID1O15344 667 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 PLPP2O43688 288 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 T-ENOLP0DO92 83 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 UGT1A1P22309 533 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 KRT20P35900 424 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 LMAN1P49257 510 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 HSD17B4P51659 736 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 SUOXP51687 545 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 STAT2P52630 851 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 PNLIPRP2P54317 469 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 CLDN20P56880 219 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 SEC61A1P61619 476 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 TMF1P82094 1093 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 DLG1Q12959 904 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 C15orf59Q2T9L4 293 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 MYLK3Q32MK0 819 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 BMP2KLQ5H9B9 411 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 GPR139Q6DWJ6 353 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 LCN10Q6JVE6 187 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 CREB3L2Q70SY1 520 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 AACSQ86V21 672 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 DNAAF5Q86Y56 855 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF34Q8IZ26 560 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 RASGEF1CQ8N431 466 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 EMC1Q8N766 993 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 LSMEM1Q8N8F7 131 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 ACVR1CQ8NER5 493 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 APPL2Q8NEU8 664 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 UTP15Q8TED0 518 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 SNRNP27Q8WVK2 155 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 CEP295NLQ96MC4 621 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 QRFPRQ96P65 431 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 SMC6Q96SB8 1091 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 PCYT2Q99447 389 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 DDOQ99489 341 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 KIFC3Q9BVG8 833 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 IL25Q9H293 177 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 PSD3Q9NYI0 1048 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 WSB2Q9NYS7 404 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF224Q9NZL3 707 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 SELENONQ9NZV5 590 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 DNAJB4Q9UDY4 337 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 POLG2Q9UHN1 485 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF112Q9UJU3 913 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 PADI1Q9ULC6 663 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 PLAGL1Q9UM63 463 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 AMDHD2Q9Y303 409 aa4.22□□□□□ -1.73
SMCHD1-213ENST00000609587 LOC100509620A0A075B734 347 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM8BA6NDV4 472 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 GLOD5A6NK44 160 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 SH2B2O14492 632 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 ADAMDEC1O15204 470 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 P4HA2O15460 535 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 AVILO75366 819 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 RSL1D1O76021 490 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 GH2P01242 217 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 LINC00271P0C7V0 271 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 CORO1AP31146 461 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 TMPOP42166 694 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 PDLIM4P50479 330 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 PPP2R2BQ00005 443 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 CALD1Q05682 793 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 SPOCK1Q08629 439 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 IGSF11Q5DX21 431 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 KRT79Q5XKE5 535 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 PRPF39Q86UA1 669 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 SPATA2LQ8IUW3 424 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 THAP6Q8TBB0 222 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 DUSP19Q8WTR2 217 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 ERP27Q96DN0 273 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 RTP4Q96DX8 246 aa4.21□□□□□ -1.74
SMCHD1-213ENST00000609587 TMEM19Q96HH6 336 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms