RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 TNNT1P13805 278 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 SLC2A4P14672 509 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 LIFP15018 202 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 BPIP17213 487 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 XRCC1P18887 633 aaPredicted RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 PTMSP20962 102 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 COMTP21964 271 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 PTPN3P26045 913 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 CDKN2BP42772 138 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 NOP2P46087 812 aaKnown RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 PPM1FP49593 454 aaPredicted RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 EPHA4P54764 986 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 RAB15P59190 212 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 DYNLT1P63172 113 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 UBE2IP63279 158 aaKnown RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 NFATC3Q12968 1075 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 PRKD1Q15139 912 aaPredicted RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 TAZQ16635 292 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 SKOR2Q2VWA4 1001 aaPredicted RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 ODF2Q5BJF6 829 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 ZNF569Q5MCW4 686 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 ALS2CLQ60I27 953 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 ANKS6Q68DC2 871 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 PDPK2PQ6A1A2 396 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 CCDC70Q6NSX1 233 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 MFSD7Q6UXD7 560 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 BZW1Q7L1Q6 419 aaKnown RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 PHYKPLQ8IUZ5 450 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 CACNA2D3Q8IZS8 1091 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 IL22RA1Q8N6P7 574 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 GLYATL1Q969I3 302 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 RTP4Q96DX8 246 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 TEKT5Q96M29 485 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 PLEKHG4BQ96PX9 1271 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 ZSCAN5AQ9BUG6 496 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 TBC1D10AQ9BXI6 508 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 GPR63Q9BZJ6 419 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 EPB41L1Q9H4G0 881 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 STN1Q9H668 368 aaKnown RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 UCK1Q9HA47 277 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 FBXO8Q9NRD0 319 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 STARD5Q9NSY2 213 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 UBP1Q9NZI7 540 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 ZNF624Q9P2J8 865 aaPredicted RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 NFKBIL1Q9UBC1 381 aaPredicted RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 PILRAQ9UKJ1 303 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 TMPRSS11EQ9UL52 423 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 ZNF711Q9Y462 761 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 SPO11Q9Y5K1 396 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 GCN1Q92616 2671 aaKnown RBP7.52□□□□□ -1.21
CUX1-219ENST00000606749 SDK2Q58EX2 2172 aa7.52□□□□□ -1.21
CUX1-219ENST00000606749 A0A0A6YYK5 440 aaPredicted RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 LOC285095A0A1B0GVY8 99 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 PRR19A6NJB7 356 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 SPOPO43791 374 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 SLC28A2O43868 658 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 VEGFDO43915 354 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 RAD1O60671 282 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 CST8O60676 142 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 MTX2O75431 263 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 CDK14O94921 469 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 EPOP01588 193 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 SLC4A1P02730 911 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 ZNF7P17097 686 aaPredicted RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 MAP4P27816 1152 aaKnown RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 CD68P34810 354 aaPredicted RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 HMGCLP35914 325 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 SLC19A1P41440 591 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 MAPK9P45984 424 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 WNT3AP56704 352 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 ADCY2Q08462 1091 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 WASHC5Q12768 1159 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 TMEM115Q12893 351 aaPredicted RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 TBX2Q13207 712 aaPredicted RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 TFDP2Q14188 446 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 CLCA4Q14CN2 919 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 LLGL1Q15334 1064 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 KHDC1Q4VXA5 237 aaKnown RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 CRTC3Q6UUV7 619 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 ABRAXAS1Q6UWZ7 409 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 TMEM26Q6ZUK4 368 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 TIPARPQ7Z3E1 657 aaKnown RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 LRRTM4Q86VH4 590 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 PLXDC1Q8IUK5 500 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 ZNF547Q8IVP9 402 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 RCOR2Q8IZ40 523 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 AVL9Q8NBF6 648 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 TFB1MQ8WVM0 346 aaKnown RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 TEFMQ96QE5 360 aaKnown RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 SRPK1Q96SB4 655 aaKnown RBP7.51□□□□□ -1.21
CUX1-219ENST00000606749 CTRCQ99895 268 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 ZPBPQ9BS86 351 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 FAM117AQ9C073 453 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 ZMYND15Q9H091 742 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 TSPY26PQ9H489 355 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 OSGEPL1Q9H4B0 414 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 BPIFA1Q9NP55 256 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 OGFRQ9NZT2 677 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms