RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PIM3Q86V86 326 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 NAGSQ8N159 534 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 SFRP1Q8N474 314 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 CCDC89Q8N998 374 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
CCDC12-209ENST00000604164 HEXDCQ8WVB3 486 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 FGF11Q92914 225 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 ULK4Q96C45 1275 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 ATXN7L3BQ96GX2 97 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 GORASP1Q9BQQ3 440 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.41□□□□□ -0.58
CCDC12-209ENST00000604164 SARS2Q9NP81 518 aaKnown RBP11.41□□□□□ -0.58
CCDC12-209ENST00000604164 THSD1Q9NS62 852 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 RABGEF1Q9UJ41 708 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 R3HDM2Q9Y2K5 976 aaKnown RBP11.41□□□□□ -0.58
CCDC12-209ENST00000604164 PCDHB1Q9Y5F3 818 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 ENTPD2Q9Y5L3 495 aa11.41□□□□□ -0.58
CCDC12-209ENST00000604164 DNMT3AQ9Y6K1 912 aaPredicted RBP11.41□□□□□ -0.58
CCDC12-209ENST00000604164 TCRBV7S2A1N4TA0A589 114 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 E7EVH7 732 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 PRAMEF1O95521 474 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 CPNE6O95741 557 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 AP2A1O95782 977 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 MPOP05164 745 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 RALBP11234 206 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 F3P13726 295 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 ZNF7P17097 686 aaPredicted RBP11.4□□□□□ -0.58
CCDC12-209ENST00000604164 MSH3P20585 1137 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 LMAN1P49257 510 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 B4GALNT1Q00973 533 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 HHEXQ03014 270 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 OASLQ15646 514 aaKnown RBP11.4□□□□□ -0.58
CCDC12-209ENST00000604164 CHRNA6Q15825 494 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 CCNG2Q16589 344 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 LONRF2Q1L5Z9 754 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 C3orf38Q5JPI3 329 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 KCTD11Q693B1 232 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 DRICH1Q6PGQ1 229 aaPredicted RBP11.4□□□□□ -0.58
CCDC12-209ENST00000604164 IYDQ6PHW0 289 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 CRTC3Q6UUV7 619 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 TRAPPC5Q8IUR0 188 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 DDHD1Q8NEL9 900 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 OR4K2Q8NGD2 314 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 OR10G6Q8NH81 332 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 SNIP1Q8TAD8 396 aaKnown RBP11.4□□□□□ -0.58
CCDC12-209ENST00000604164 ZNF398Q8TD17 642 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 CCDC97Q96F63 343 aaPredicted RBP11.4□□□□□ -0.58
CCDC12-209ENST00000604164 AHCYL2Q96HN2 611 aaKnown RBP11.4□□□□□ -0.58
CCDC12-209ENST00000604164 NAP1L3Q99457 506 aaPredicted RBP11.4□□□□□ -0.58
CCDC12-209ENST00000604164 SLC38A3Q99624 504 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 CMKLR1Q99788 373 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 APOL2Q9BQE5 337 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 OSGEPL1Q9H4B0 414 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 EPB41L1Q9H4G0 881 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 KLC4Q9NSK0 619 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 KCNK4Q9NYG8 393 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 PAK5Q9P286 719 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 SATB2Q9UPW6 733 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 KCNK6Q9Y257 313 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 RAXQ9Y2V3 346 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 PRKAB1Q9Y478 270 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 JRKLQ9Y4A0 524 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 PLEKHM1Q9Y4G2 1056 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 ARL5AQ9Y689 179 aa11.4□□□□□ -0.58
CCDC12-209ENST00000604164 A0A087WV48 116 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 A0A1W2PQM1 296 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 AP3B1O00203 1094 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 TAF4O00268 1085 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 PLD2O14939 933 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 SNX2O60749 519 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 SRP72O76094 671 aaKnown RBP11.39□□□□□ -0.59
CCDC12-209ENST00000604164 IFNB1P01574 187 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 ITGALP20701 1170 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 IDSP22304 550 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 AKT1P31749 480 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 HALP42357 657 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 PPM1FP49593 454 aaPredicted RBP11.39□□□□□ -0.59
CCDC12-209ENST00000604164 EPHA4P54764 986 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 PCBP4P57723 403 aaKnown RBP11.39□□□□□ -0.59
CCDC12-209ENST00000604164 NFATC2Q13469 925 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 SQSTM1Q13501 440 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 TRA2AQ13595 282 aaKnown RBP eCLIP11.39□□□□□ -0.591e-7■■□□□ 12.2
CCDC12-209ENST00000604164 AMZ1Q400G9 498 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 GPR33Q49SQ1 333 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 WASH2PQ6VEQ5 465 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 AMZ2Q86W34 360 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 TRIM48Q8IWZ4 208 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 RBM12BQ8IXT5 1001 aaKnown RBP11.39□□□□□ -0.59
CCDC12-209ENST00000604164 DNAAF3Q8N9W5 541 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 SLC37A2Q8TED4 501 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 ATG4AQ8WYN0 398 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 DCUN1D1Q96GG9 259 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 ZMYND15Q9H091 742 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 EPB41L5Q9HCM4 733 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 ARFGAP3Q9NP61 516 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 WASH6PQ9NQA3 447 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 TBC1D29Q9UFV1 150 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 CRLS1Q9UJA2 301 aa11.39□□□□□ -0.59
CCDC12-209ENST00000604164 DRG1Q9Y295 367 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms