RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 SNAP91O60641 907 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MMP20O60882 483 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MITFO75030 526 aaPredicted RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 AKR7A3O95154 331 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CYC1P08574 325 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 STAG3L3P0CL85 134 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PSMC3P17980 439 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PDHA2P29803 388 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MC4RP32245 332 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CASP3P42574 277 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ACAA2P42765 397 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GABRB2P47870 512 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 KCNJ1P48048 391 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 RGS7P49802 495 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 STAT5BP51692 787 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 NDST2P52849 883 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 HUNKP57058 714 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 RAC3P60763 192 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ERVK-21P61565 698 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GTF2H3Q13889 308 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TBCEQ15813 527 aaPredicted RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PDK4Q16654 411 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PFKFB4Q16877 469 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 KIZQ2M2Z5 673 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 C6orf52Q5T4I8 152 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ATXN7L2Q5T6C5 722 aaPredicted RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 JADE1Q6IE81 842 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ARSKQ6UWY0 536 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GK5Q6ZS86 529 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 COPS6Q7L5N1 327 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TLK2Q86UE8 772 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TMC8Q8IU68 726 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 IRF2BP1Q8IU81 584 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 NUDCD3Q8IVD9 361 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CCDC36Q8IYA8 594 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CLYBLQ8N0X4 340 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ARL14Q8N4G2 192 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 RBM15BQ8NDT2 890 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ETNPPLQ8TBG4 499 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PIGBQ92521 554 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 KAT2AQ92830 837 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 DCPSQ96C86 337 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ARHGEF26Q96DR7 871 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PRR11Q96HE9 360 aaPredicted RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 RBM15Q96T37 977 aaKnown RBP eCLIP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TMEM120AQ9BXJ8 343 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 COQ10BQ9H8M1 238 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PLA2G4CQ9UP65 541 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GAB2Q9UQC2 676 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 C4AP0C0L4 1744 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 C4BP0C0L5 1744 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 KDM3AQ9Y4C1 1321 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 NHSQ6T4R5 1651 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ZMYM2Q9UBW7 1377 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 TRAV34A0A0B4J273 112 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ESYT2A0FGR8 921 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 XKRY2A2RUG3 117 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 POM121BA6NF01 834 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 CLDN25C9JDP6 229 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 RNF103O00237 685 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 PLK4O00444 970 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 BTN3A1O00481 513 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 AKR7A2O43488 359 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 CCNKO75909 580 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 C22orf31O95567 290 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 SNAP29O95721 258 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ENO1P06733 434 aaKnown RBP4.7□□□□□ -1.66
LINC01109-201ENST00000603837 PRKAR1AP10644 381 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 TNNI3P19429 210 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 KLRC1P26715 233 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ARNTP27540 789 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 RBL1P28749 1068 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ARSEP51690 589 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 LUMP51884 338 aaPredicted RBP4.7□□□□□ -1.66
LINC01109-201ENST00000603837 NME5P56597 212 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 CDK16Q00536 496 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 RRP1BQ14684 758 aaKnown RBP4.7□□□□□ -1.66
LINC01109-201ENST00000603837 FAM110CQ1W6H9 321 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 KIAA1755Q5JYT7 1200 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 RARS2Q5T160 578 aaKnown RBP4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ADGRF1Q5T601 910 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 KRT40Q6A162 431 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 PLEKHG7Q6ZR37 379 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 PLPPR4Q7Z2D5 763 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 HPS6Q86YV9 775 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 LINC00346Q8IVM7 164 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 C12orf56Q8IXR9 622 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 METTL13Q8N6R0 699 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 TTC29Q8NA56 475 aaPredicted RBP4.7□□□□□ -1.66
LINC01109-201ENST00000603837 TDRD5Q8NAT2 981 aaKnown RBP4.7□□□□□ -1.66
LINC01109-201ENST00000603837 OR7D4Q8NG98 312 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 GPR150Q8NGU9 434 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF420Q8TAQ5 688 aaPredicted RBP4.7□□□□□ -1.66
LINC01109-201ENST00000603837 SLC2A14Q8TDB8 520 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 TMEM80Q96HE8 168 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 CAMKK2Q96RR4 588 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF347Q96SE7 839 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 ATP6V0BQ99437 205 aa4.7□□□□□ -1.66
LINC01109-201ENST00000603837 CNPPD1Q9BV87 410 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms