RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 PSMC3IPQ9P2W1 217 aaPredicted RBP22.7■■□□□ 1.22
IRF3-227ENST00000600911 GALPQ9UBC7 116 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 TMEM98Q9Y2Y6 226 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 MYO15AQ9UKN7 3530 aa22.7■■□□□ 1.22
IRF3-227ENST00000600911 A0A1W2PPC4 97 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 NDUFS3O75489 264 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 SLC25A14O95258 325 aaPredicted RBP22.69■■□□□ 1.22
IRF3-227ENST00000600911 ITGA2BP08514 1039 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 FMO4P31512 558 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 TTPAP49638 278 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 LIMK2P53671 638 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 EIF3BP55884 814 aaKnown RBP22.69■■□□□ 1.22
IRF3-227ENST00000600911 MROH9Q5TGP6 573 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 LAYNQ6UX15 382 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 GALNT7Q86SF2 657 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 SDCCAG8Q86SQ7 713 aaPredicted RBP22.69■■□□□ 1.22
IRF3-227ENST00000600911 GDAP1Q8TB36 358 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 SLC6A18Q96N87 628 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 RHOJQ9H4E5 214 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 INTS10Q9NVR2 710 aaKnown RBP22.69■■□□□ 1.22
IRF3-227ENST00000600911 EIF2B4Q9UI10 523 aaKnown RBP22.69■■□□□ 1.22
IRF3-227ENST00000600911 ZNF180Q9UJW8 692 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 FBXO4Q9UKT5 387 aa22.69■■□□□ 1.22
IRF3-227ENST00000600911 PNMA8BQ9ULN7 279 aaPredicted RBP22.69■■□□□ 1.22
IRF3-227ENST00000600911 FUCA1P04066 466 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 SP9P0CG40 484 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 POLD2P49005 469 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 CTSCP53634 463 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 CSE1LP55060 971 aaKnown RBP22.68■■□□□ 1.22
IRF3-227ENST00000600911 ANGPT1Q15389 498 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 GRTP1Q5TC63 336 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 ADGRG6Q86SQ4 1221 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 RASGEF1AQ8N9B8 481 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 ARL8AQ96BM9 186 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 FAM136AQ96C01 138 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 ULK4Q96C45 1275 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 OLFM1Q99784 485 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 CCDC77Q9BR77 488 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 ROPN1BQ9BZX4 212 aaPredicted RBP22.68■■□□□ 1.22
IRF3-227ENST00000600911 ROPN1Q9HAT0 212 aaPredicted RBP22.68■■□□□ 1.22
IRF3-227ENST00000600911 A0A1W2PPM1 405 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 CDKN2DP55273 166 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 DOK6Q6PKX4 331 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 CERS6Q6ZMG9 384 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 FANCMQ8IYD8 2048 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 KRT222Q8N1A0 295 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 DCLK2Q8N568 766 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 DENND6BQ8NEG7 585 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 CADM4Q8NFZ8 388 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.68■■□□□ 1.22
IRF3-227ENST00000600911 HIC2Q96JB3 615 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 TCF12Q99081 682 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 COPS8Q99627 209 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 APOOQ9BUR5 198 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 NSMCE4AQ9NXX6 385 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 ATXN10Q9UBB4 475 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 LGALS13Q9UHV8 139 aa22.68■■□□□ 1.22
IRF3-227ENST00000600911 FAM95CA0A1B0GW59 222 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 TMEM202A6NGA9 273 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 TRIM49D1C9J1S8 452 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 NIPSNAP2O75323 286 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 PFN3P60673 137 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 ZNF460Q14592 562 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 ITIH4Q14624 930 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 AARS2Q5JTZ9 985 aaKnown RBP22.67■■□□□ 1.22
IRF3-227ENST00000600911 SLC36A4Q6YBV0 504 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 CMC1Q7Z7K0 106 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 PHYKPLQ8IUZ5 450 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 BEND7Q8N7W2 519 aaPredicted RBP22.67■■□□□ 1.22
IRF3-227ENST00000600911 GPATCH11Q8N954 259 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 GAB3Q8WWW8 586 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 FOXJ1Q92949 421 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 SGF29Q96ES7 293 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 SERAC1Q96JX3 654 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 GPR22Q99680 433 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 SLC30A3Q99726 388 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 OR2AG1Q9H205 316 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 WDR26Q9H7D7 661 aa22.67■■□□□ 1.22
IRF3-227ENST00000600911 MAP3K13O43283 966 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 CDH16O75309 829 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 ALDOAP04075 364 aaKnown RBP22.66■■□□□ 1.22
IRF3-227ENST00000600911 WNT1P04628 370 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 IVLP07476 585 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 ITGB6P18564 788 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 TEAD1P28347 426 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 AKT1P31749 480 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 AKT2P31751 481 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 TMEM115Q12893 351 aaPredicted RBP22.66■■□□□ 1.22
IRF3-227ENST00000600911 NAPRTQ6XQN6 538 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 PIM3Q86V86 326 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 CEP97Q8IW35 865 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 RBFAQ8N0V3 343 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 SLC22A18ASQ8N1D0 253 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 OR13H1Q8NG92 308 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 C1orf216Q8TAB5 229 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 SH3GL2Q99962 352 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 AARSD1Q9BTE6 412 aaKnown RBP22.66■■□□□ 1.22
IRF3-227ENST00000600911 C1QTNF7Q9BXJ2 289 aa22.66■■□□□ 1.22
IRF3-227ENST00000600911 DUSP15Q9H1R2 295 aaPredicted RBP22.66■■□□□ 1.22
IRF3-227ENST00000600911 TMBIM4Q9HC24 238 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms