RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 HEBP1Q9NRV9 189 aa12.66□□□□□ -0.38
ZNF548-210ENST00000600442 ZDHHC3Q9NYG2 299 aa12.66□□□□□ -0.38
ZNF548-210ENST00000600442 DLGAP2Q9P1A6 1054 aa12.66□□□□□ -0.38
ZNF548-210ENST00000600442 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.66□□□□□ -0.38
ZNF548-210ENST00000600442 SIT1Q9Y3P8 196 aa12.66□□□□□ -0.38
ZNF548-210ENST00000600442 ACACBO00763 2458 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 SNUPNO95149 360 aaKnown RBP12.65□□□□□ -0.38
ZNF548-210ENST00000600442 KLF8O95600 359 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-210ENST00000600442 FAM107AO95990 144 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 SP9P0CG40 484 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 MYL2P10916 166 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 CPA3P15088 417 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 MSH3P20585 1137 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 LHCGRP22888 699 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 GRK2P25098 689 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 AKT1P31749 480 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 P2RY2P41231 377 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 ABCG1P45844 678 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 RGS4P49798 205 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 IL2P60568 153 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 MPP2Q14168 576 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 PUM1Q14671 1186 aaKnown RBP eCLIP12.65□□□□□ -0.38
ZNF548-210ENST00000600442 ACAP2Q15057 778 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 TMEM52BQ4KMG9 183 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-210ENST00000600442 LRRC8EQ6NSJ5 796 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 RGS9BPQ6ZS82 235 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 LDB1Q86U70 411 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-210ENST00000600442 KBTBD6Q86V97 674 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 NLRP8Q86W28 1048 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 HDDC3Q8N4P3 179 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 BCAS4Q8TDM0 211 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 SMIM14Q96QK8 99 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 NELL2Q99435 816 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 NDNQ99608 321 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 MRPL57Q9BQC6 102 aaKnown RBP12.65□□□□□ -0.38
ZNF548-210ENST00000600442 PLCD4Q9BRC7 762 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 PITPNM3Q9BZ71 974 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 MRPL46Q9H2W6 279 aaKnown RBP12.65□□□□□ -0.38
ZNF548-210ENST00000600442 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 MANSC1Q9H8J5 431 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 ZDHHC4Q9NPG8 344 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 SMOXQ9NWM0 555 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 KLHL42Q9P2K6 505 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 SLC17A7Q9P2U7 560 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 SARDHQ9UL12 918 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 TMCO1Q9UM00 188 aa12.65□□□□□ -0.38
ZNF548-210ENST00000600442 TRBV5-4A0A0C4DH59 114 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PABPN1LA6NDY0 278 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 TCP11X1B4DZS4 312 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 AREL1O15033 823 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PHGDHO43175 533 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PLIN3O60664 434 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 RNASEH2AO75792 299 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 AP2A2O94973 939 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 EGFP01133 1207 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 C1SP09871 688 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 SLC35E2BP0CK96 405 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 CCDC166P0CW27 439 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 FDXRP22570 491 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 WASP42768 502 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 WDR4P57081 412 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 SGCGQ13326 291 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PPM1JQ5JR12 505 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 NAIF1Q69YI7 327 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PSAPL1Q6NUJ1 521 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 ZC3H14Q6PJT7 736 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 LIPIQ6XZB0 460 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 MACC1Q6ZN28 852 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 Q6ZVL8 140 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 RAB44Q7Z6P3 723 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PHYKPLQ8IUZ5 450 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 C1orf210Q8IVY1 113 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PIANPQ8IYJ0 282 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 KIRREL3Q8IZU9 778 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 TXNDC5Q8NBS9 432 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 GPR26Q8NDV2 337 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 PPP4R1Q8TF05 950 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 INPP5DQ92835 1189 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 ARRDC3Q96B67 414 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 EID2BQ96D98 161 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 ACOX2Q99424 681 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 WRAP53Q9BUR4 548 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 FBRSL1Q9HCM7 1045 aaKnown RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 POLMQ9NP87 494 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-210ENST00000600442 ARHGEF3Q9NR81 526 aa12.64□□□□□ -0.39
ZNF548-210ENST00000600442 SYCE1LA8MT33 242 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 KLF11O14901 512 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 MID1O15344 667 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 SMIM24O75264 130 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 PCDH8O95206 1070 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 FTH1P02794 183 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 BPGMP07738 259 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 DHRS4L1P0CG22 281 aa12.63□□□□□ -0.39
ZNF548-210ENST00000600442 TROVE2P10155 538 aaKnown RBP eCLIP12.63□□□□□ -0.39
ZNF548-210ENST00000600442 DGKAP23743 735 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms